Evidence map›Paper›PMID 15824062›Full record

ArticleNucleic acids research2005

Torque-limited RecA polymerization on dsDNA.

Thijn van der Heijden, John van Noort, Hendrikje van Leest, Roland Kanaar, Claire Wyman, Nynke H Dekker, Nynke Dekker, Cees Dekker

Erratum issuedAbstract read
In one paragraph

Article in Nucleic acids research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. How strand exchange protein function benefits from ATP hydrolysis.Current opinion in genetics & development · 2021
    Review
  2. Review
  3. Article
  4. Article
  5. Mediators of homologous DNA pairing.Cold Spring Harbor perspectives in biology · 2014
    Review
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  7. Article
  8. Article
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  10. Article
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  14. Review
  15. Article
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  17. Review
  18. Article
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4 · The record

Corrections and comments

  • Erratum issued
    Dekker, Nynke [corrected to Dekker, Nynke H]
5 · Who and what money

Authors and funding

8 authors.

Thijn van der HeijdenKavli Institute of Nanoscience, Delft University of Technology Lorentzweg 1, 2628 CJ Delft, The Netherlands.
John van Noort
Hendrikje van Leest
Roland Kanaar
Claire Wyman
Nynke H Dekker
Nynke Dekker
Cees Dekker

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The assembly of RecA onto a torsionally constrained double-stranded DNA molecule was followed in real time using magnetic tweezers. Formation of a RecA-DNA filament on the DNA tether was stalled owing to different physical processes depending on the applied stretching force. For forces up to 3.6 pN, the reaction stalled owing to the formation of positive plectonemes in the remaining DNA molecule. Release of these plectonemes by rotation of the magnets led to full coverage of the DNA molecule by RecA. At stretching forces larger than 3.6 pN, the twist induced during filament formation caused the reaction to stall before positive supercoils were generated. We deduce a maximum built-up torsion of 10.1 +/- 0.7 k(b)T. In vivo this built-up torsion may be used to favor regression of a stalled replication fork or to free the chromosomal DNA in E.coli from its condensing proteins.

Indexed as

BiopolymersDNADNA-Binding ProteinsProtein BindingRec A RecombinasesTorqueTorsion AbnormalityBiopolymersDNADNA-Binding ProteinsRec A Recombinases

Identifiers

PMID15824062
PMCPMC1075924

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.