Evidence map›Paper›PMID 15823604›Full record

ArticleVirology2005

Identification of murine CD8 T cell epitopes in codon-optimized SARS-associated coronavirus spike protein.

Yan Zhi, Gary P Kobinger, Heather Jordan, Katie Suchma, Susan R Weiss, Hao Shen, Gregory Schumer, Guangping Gao, Julie L Boyer, Ronald G Crystal and 1 more

Abstract read
In one paragraph

Article in Virology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 88 citations in OpenAlex.

  1. Article
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  5. mRNA-LNP vaccine-induced CD8Molecular therapy : the journal of the American Society of Gene Therapy · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. SARS-CoV-2-Specific CD8Vaccines · 2023
    Article
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  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Yan ZhiGene Therapy Program, Division of Medical Genetics, Department of Medicine, University of Pennsylvania Health System, and The Wistar Institute, Philadelphia, PA 19104, USA.
Gary P Kobinger
Heather Jordan
Katie Suchma
Susan R Weiss
Hao Shen
Gregory Schumer
Guangping Gao
Julie L Boyer
Ronald G Crystal
James M Wilson
The Wistar Institute · USUniversity of Pennsylvania · USCornell University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The causative agent of severe acute respiratory syndrome (SARS) has been identified as a new type of coronavirus, SARS-associated coronavirus (SARS-CoV). CD8 T cells play an important role in controlling diseases caused by other coronaviruses and in mediating vaccine-induced protective immunity in corresponding animal models. The spike protein, a main surface antigen of SARS-CoV, is one of the most important antigen candidates for vaccine design. Overlapping peptides were used to identify major histocompatibility complex class I-restricted epitopes in mice immunized with vectors encoding codon-optimized SARS-CoV spike protein. CD8 T-cell responses were mapped to two H-2(b)-restricted epitopes (S436-443 and S525-532) and one H-2(d)-restricted epitope (S366-374). The identification of these epitopes will facilitate the evaluation of vaccine strategies in murine models of SARS-CoV infection. Furthermore, codon and promoter optimizations can greatly enhance the overall immunogenicity of spike protein in the context of replication-defective human and simian adenoviral vaccine carriers. The optimized recombinant adenoviral vaccine vectors encoding spike can generate robust antigen-specific cellular immunity in mice and may potentially be useful for control of SARS-CoV infection.

Indexed as

Epitope MappingAdenoviruses, HumanAmino Acid SequenceAnimalsCD8-Positive T-LymphocytesCell LineChlorocebus aethiopsCodonEpitopes, T-LymphocyteGenetic VectorsH-2 AntigensHistocompatibility Antigen H-2DHumansImmunizationMembrane GlycoproteinsMiceCodonEpitopes, T-LymphocyteH-2 AntigensHistocompatibility Antigen H-2DMembrane GlycoproteinsPeptidesSpike Glycoprotein, CoronavirusViral Envelope ProteinsViral Vaccines

Identifiers

PMID15823604
PMCPMC7111773
OpenAlexW2061675358

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.