ArticleApplied and environmental microbiology2005
Diversity and phylogenetic affiliations of morphologically conspicuous large filamentous bacteria occurring in the pelagic zones of a broad spectrum of freshwater habitats.
Article in Applied and environmental microbiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.
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Who cites it
23 citing papers in PubMed, 1 synthesis or guideline pooled it, 71 citations in OpenAlex.
- A guide to the natural history of freshwater lake bacteria.Microbiology and molecular biology reviews : MMBR · 2011Pooled it
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- Diversity and Ecophysiology of the Genus OLB8 and Other Abundant UnculturedFrontiers in microbiology · 2022Article
- The balance between deterministic and stochastic processes in structuring lake bacterioplankton community over time.Molecular ecology · 2020Article
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- Variations in Bacterial Community in a Temperate Lake Associated with an Agricultural Watershed.Microbial ecology · 2016Article
- Complete ecological isolation and cryptic diversity in Polynucleobacter bacteria not resolved by 16S rRNA gene sequences.The ISME journal · 2016Article
- Temperature-dependent variations in sulfate-reducing communities associated with a terrestrial hydrocarbon seep.Microbes and environments · 2014Article
- High bacterial diversity in epilithic biofilms of oligotrophic mountain lakes.Microbial ecology · 2012Article
- What's new is old: resolving the identity of Leptothrix ochracea using single cell genomics, pyrosequencing and FISH.PloS one · 2011Article
- Low taxon richness of bacterioplankton in high-altitude lakes of the eastern tibetan plateau, with a predominance of Bacteroidetes and Synechococcus spp.Applied and environmental microbiology · 2009Article
- Phylogenetic profiling of bacterial community from two intimately located sites in Balramgari, North-East coast of India.Indian journal of microbiology · 2009Article
- Inter- and intraspecific variations of bacterial communities associated with marine sponges from san juan island, washington.Applied and environmental microbiology · 2009Article
- Identification and ecophysiological characterization of epiphytic protein-hydrolyzing saprospiraceae ("Candidatus Epiflobacter" spp.) in activated sludge.Applied and environmental microbiology · 2008Article
- Amyloid-like adhesins produced by floc-forming and filamentous bacteria in activated sludge.Applied and environmental microbiology · 2008Article
- Suitability of flow cytometry for estimating bacterial biovolume in natural plankton samples: comparison with microscopy data.Applied and environmental microbiology · 2007Article
- Recurrent seasonal variations in abundance and composition of filamentous SOL cluster bacteria (Saprospiraceae, Bacteroidetes) in oligomesotrophic Lake Mondsee (Austria).Applied and environmental microbiology · 2006Article
- Direct and indirect effects of protist predation on population size structure of a bacterial strain with high phenotypic plasticity.Applied and environmental microbiology · 2006Article
Corrections and comments
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Authors and funding
2 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Filamentous bacteria with a conspicuous morphology were found in the majority of the bacterioplankton samples from a variety of freshwater habitats that were studied. These heterotrophic filaments typically account for < 1 to 11% of the total number of bacteria. The biovolume of this morphotype can exceed 40% of the biovolume for all bacteria. Surprisingly, we found hardly any data on these morphologically conspicuous filaments in the literature. Mixed cultures containing these filamentous bacteria were established by cultivation and isolation experiments with samples from different freshwater lakes. Nearly full-length 16S rRNA gene sequences were obtained from several mixed cultures and environmental samples from habitats in Europe, Africa, China, Australia, and New Zealand. Phylogenetic analysis of the sequences showed that three groups form a single monophyletic cluster, the SOL cluster, in the family Saprospiraceae. We developed a set of six nested probes for fluorescence in situ hybridization. Of the six probes, one probe was specific for Haliscomenobacter hydrossis, three probes were specific for the three subclusters (each probe was specific for one subcluster), one probe was specific for the entire SOL cluster, and another probe targeted almost the entire Saprospiraceae family. Specific hybridization of environmental samples and enrichments showed that the members of the three subclusters exhibited the same filamentous morphology. So far, using the subcluster-specific probes, we have not been able to detect any bacteria with a differing morphology. We conclude that the SOL cluster bacteria are an integral part of bacterioplankton in many freshwater habitats. They potentially account for a large fraction of the total bacterial biomass but have been underrepresented in molecular diversity studies so far.
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