Evidence map›Paper›PMID 15802508›Full record

ArticleGenetics2005

Chromosome sorting in tetraploid wheat and its potential for genome analysis.

Marie Kubaláková, Pavlína Kovárová, Pavla Suchánková, Jarmila Cíhalíková, Jan Bartos, Sergio Lucretti, Nobuyoshi Watanabe, Shahryar F Kianian, Jaroslav Dolezel

Abstract read
In one paragraph

Article in Genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

  1. Article
  2. Article
  3. Pathogens (Basel, Switzerland) · 2025
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Flow karyotyping of wheat-Frontiers in plant science · 2022
    Article
  9. Chromosome analysis and sorting.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2021
    Review
  10. Article
  11. FISH karyotype comparison between AJournal of applied genetics · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Evolution of the S-Genomes inFrontiers in plant science · 2018
    Article
  16. Cytomolecular discrimination of the AJournal of applied genetics · 2017
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Marie KubalákováLaboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Olomouc, Czech Republic.
Pavlína Kovárová
Pavla Suchánková
Jarmila Cíhalíková
Jan Bartos
Sergio Lucretti
Nobuyoshi Watanabe
Shahryar F Kianian
Jaroslav Dolezel

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study evaluates the potential of flow cytometry for chromosome sorting in durum wheat (Triticum turgidum Desf. var. durum, 2n = 4x = 28). Histograms of fluorescence intensity (flow karyotypes) obtained after the analysis of DAPI-stained chromosomes consisted of three peaks. Of these, one represented chromosome 3B, a small peak corresponded to chromosomes 1A and 6A, and a large peak represented the remaining 11 chromosomes. Chromosomes sorted onto microscope slides were identified after fluorescence in situ hybridization (FISH) with probes for GAA microsatellite, pSc119.2, and Afa repeats. Genomic distribution of these sequences was determined for the first time in durum wheat and a molecular karyotype has been developed for this crop. Flow karyotyping in double-ditelosomic lines of durum wheat revealed that the lines facilitated sorting of any arm of the wheat A- and B-genome chromosomes. Compared to hexaploid wheat, flow karyotype of durum wheat is less complex. This property results in better discrimination of telosomes and high purities in sorted fractions, ranging from 90 to 98%. We have demonstrated that large insert libraries can be created from DNA purified using flow cytometry. This study considerably expands the potential of flow cytogenetics for use in wheat genomics and opens the possibility of sequencing the genome of this important crop one chromosome arm at a time.

Indexed as

Genome, PlantCell CycleCell SeparationChromosome MappingChromosomesChromosomes, PlantDNADNA, PlantFlow CytometryGenetic TechniquesGenomeIn Situ Hybridization, FluorescenceKaryotypingMetaphaseMicrosatellite RepeatsModels, GeneticDNADNA, Plant

Identifiers

PMID15802508
PMCPMC1450420

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.