Evidence map›Paper›PMID 15795272›Full record

ArticleJournal of virology2005

Escape mutations alter proteasome processing of major histocompatibility complex class I-restricted epitopes in persistent hepatitis C virus infection.

Yoichi Kimura, Toshifumi Gushima, Sharad Rawale, Pravin Kaumaya, Christopher M Walker

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 53 citations in OpenAlex.

  1. Immune escape pathways from the HBV coreFrontiers in immunology · 2022
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  18. Regulation of protein translation through mRNA structure influences MHC class I loading and T cell recognition.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Yoichi KimuraCenter for Vaccines and Immunity, Children's Hospital, WA4011, 700 Children's Dr., Columbus, OH 43205, USA.
Toshifumi Gushima
Sharad Rawale
Pravin Kaumaya
Christopher M Walker
Children’s Institute · US

Funding

Virus specific T cells in replication/evolution of HCVU19AI048231 · NIAID · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI KALAMS, SPYROS A · 2000 to 2009
$10.1M
NIAID NIH HHS U19 AI048231NIAID NIH HHS U19 AI48231PHS HHS R01 A147367
6 · The paper itself

Abstract

Mutations in hepatitis C virus (HCV) genomes facilitate escape from virus-specific CD8+ T lymphocytes in persistently infected chimpanzees. Our previous studies demonstrated that many of the amino acid substitutions in HCV epitopes prevented T-cell receptor recognition or binding to class I major histocompatibility complex molecules. Here we report that mutations within HCV epitopes also cause their destruction by changing the pattern of proteasome digestion. This mechanism of immune evasion provides further evidence of the potency of CD8+ T-cell selection pressure against HCV and should be considered when evaluating the significance of mutations in viral genomes from persistently infected chimpanzees and humans.

Indexed as

MutationAmino Acid SequenceAnimalsCD8-Positive T-LymphocytesDisease Models, AnimalHepatitis CMajor Histocompatibility ComplexMolecular Sequence DataPan troglodytesProteasome Endopeptidase ComplexViral Nonstructural ProteinsViral ProteinsNS4 protein, hepatitis C virusProteasome Endopeptidase ComplexViral Nonstructural ProteinsViral Proteins

Identifiers

PMID15795272
PMCPMC1069526
OpenAlexW2123206156

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.