Evidence map›Paper›PMID 15784745›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2005

Target-directed proteolysis at the ribosome.

Tanja Henrichs, Natasha Mikhaleva, Charlotte Conz, Elke Deuerling, Dana Boyd, Adrian Zelazny, Eitan Bibi, Nenad Ban, Michael Ehrmann

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Tanja HenrichsSchool of Biosciences, Cardiff University, Cardiff CF10 3US, UK.
Natasha Mikhaleva
Charlotte Conz
Elke Deuerling
Dana Boyd
Adrian Zelazny
Eitan Bibi
Nenad Ban
Michael Ehrmann
University of Konstanz · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Target directed proteolysis allows specific processing of proteins in vivo. This method uses tobacco etch virus (TEV) NIa protease that recognizes a seven-residue consensus sequence. Because of its specificity, proteins engineered to contain a cleavage site are proteolysed, whereas other proteins remain unaffected. Therefore, this approach can be used to study the structure and function of target proteins in their natural environment within living cells. One application is the conditional inactivation of essential proteins, which is based on the concept that a target containing a recognition site can be inactivated by coexpressed TEV protease. We have previously identified one site in the secretion factor SecA that tolerated a TEV protease site insert. Coexpression of TEV protease in the cytoplasm led to incomplete cleavage and a mild secretion defect. To improve the efficiency of proteolysis, TEV protease was attached to the ribosome. We show here that cleaving SecA under these conditions is one way of increasing the efficiency of target directed proteolysis. The implications of recruiting novel biological activities to ribosomes are discussed.

Indexed as

Adenosine TriphosphatasesBacterial ProteinsBinding SitesChromosomes, BacterialCytoplasmEndopeptidasesEscherichia coliEscherichia coli ProteinsMembrane Transport ProteinsModels, BiologicalReceptors, Cytoplasmic and NuclearRecombinant ProteinsRibosomesSecA ProteinsSEC Translocation ChannelsSignal Recognition ParticleAdenosine TriphosphatasesBacterial ProteinsEndopeptidasesEscherichia coli ProteinsFfh protein, E coliFtsY protein, BacteriaMembrane Transport ProteinsReceptors, Cytoplasmic and NuclearRecombinant ProteinsSecA ProteinsSEC Translocation ChannelsSignal Recognition ParticleTEV protease

Identifiers

PMID15784745
PMCPMC555484
OpenAlexW2088609578

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.