ArticleBiophysical journal2005
Lipid bilayer perturbations around a transmembrane nanotube: a coarse grain molecular dynamics study.
Article in Biophysical journal, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed.
- Real-time dynamics of carbon nanotube porins in supported lipid membranes visualized by high-speed atomic force microscopy.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017Article
- Effects of nanobubble collapse on cell membrane integrity.Journal of micromechanics and molecular physics · 2017Article
- Computational design of a CNT carrier for a high affinity bispecific anti-HER2 antibody based on trastuzumab and pertuzumab Fabs.Journal of molecular modeling · 2013Article
- Lipid nanotechnology.International journal of molecular sciences · 2013Article
- Aggregation of model membrane proteins, modulated by hydrophobic mismatch, membrane curvature, and protein class.Biophysical journal · 2011Article
- Synthetic chloride-selective carbon nanotubes examined by using molecular and stochastic dynamics.Biophysical journal · 2010Article
- Coarse-grained molecular dynamics of tetrameric transmembrane peptide bundles within a lipid bilayer.Chemistry and physics of lipids · 2010Article
- Peptide nanopores and lipid bilayers: interactions by coarse-grained molecular-dynamics simulations.Biophysical journal · 2009Article
- Multiscale methods for macromolecular simulations.Current opinion in structural biology · 2008Review
- Lipid bilayer deformation and the free energy of interaction of a Kv channel gating-modifier toxin.Biophysical journal · 2008Article
- Colloid adsorption onto responsive membranes.Biophysical journal · 2008Article
- Simulations of electrophoretic RNA transport through transmembrane carbon nanotubes.Biophysical journal · 2008Article
- Contributions of Gaussian curvature and nonconstant lipid volume to protein deformation of lipid bilayers.Biophysical journal · 2007Article
- Molecular dynamics simulations of model trans-membrane peptides in lipid bilayers: a systematic investigation of hydrophobic mismatch.Biophysical journal · 2006Article
- Coarse grained protein-lipid model with application to lipoprotein particles.The journal of physical chemistry. B · 2006Article
- A consistent model for thermal fluctuations and protein-induced deformations in lipid bilayers.Biophysical journal · 2006Article
- Implicit solvent simulation models for biomembranes.European biophysics journal : EBJ · 2006Review
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Corrections and comments
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Authors and funding
5 authors.
Funding
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Abstract
The perturbations induced in a lipid bilayer by the presence of a transmembrane nanotube are investigated using coarse grained molecular dynamics. Meniscus formation by the lipids and tilting of the nanotube occur in response to hydrophobic mismatch, although these two effects do not compensate completely for the total mismatch. The lipid head-to-tail vector field is examined and shows strong ordering in the membrane plane regardless of the nanotube length. Molecular layering at the lipid-nanotube interface is reported. This study extends previous theoretical approaches to a more realistic setting.
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