Evidence map›Paper›PMID 15778432›Full record

ArticleNucleic acids research2005

Two modes of microsatellite instability in human cancer: differential connection of defective DNA mismatch repair to dinucleotide repeat instability.

Shinya Oda, Yoshihiko Maehara, Yoichi Ikeda, Eiji Oki, Akinori Egashira, Yoshikazu Okamura, Ikuo Takahashi, Yoshihiro Kakeji, Yasushi Sumiyoshi, Kaname Miyashita and 9 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
  2. HTLV-1 bZIP factor impairs DNA mismatch repair system.Biochemical and biophysical research communications · 2023
    Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Modal variety of microsatellite instability in human endometrial carcinomas.Journal of cancer research and clinical oncology · 2016
    Article
  9. Article
  10. Implication of microsatellite instability in human gastric cancers.The Indian journal of medical research · 2012
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 1 institution in 1 country.

Shinya OdaInstitute for Clinical Research, National Kyushu Cancer Center, Fukuoka 811-1395, Japan. soda@nk-cc.go.jp
Yoshihiko Maehara
Yoichi Ikeda
Eiji Oki
Akinori Egashira
Yoshikazu Okamura
Ikuo Takahashi
Yoshihiro Kakeji
Yasushi Sumiyoshi
Kaname Miyashita
Yu Yamada
Yan Zhao
Hiroyoshi Hattori
Ken-ichi Taguchi
Tatsuro Ikeuchi
Teruhisa Tsuzuki
Mutsuo Sekiguchi
Peter Karran
Mitsuaki A Yoshida
National Hospital Organization Kyushu Cancer Center · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microsatellite instability (MSI) is associated with defective DNA mismatch repair in various human malignancies. Using a unique fluorescent technique, we have observed two distinct modes of dinucleotide microsatellite alterations in human colorectal cancer. Type A alterations are defined as length changes of < or =6 bp. Type B changes are more drastic and involve modifications of > or =8 bp. We show here that defective mismatch repair is necessary and sufficient for Type A changes. These changes were observed in cell lines and in tumours from mismatch repair gene-knockout mice. No Type B instability was seen in these cells or tumours. In a panel of human colorectal tumours, both Type A MSI and Type B instability were observed. Both types of MSI were associated with hMSH2 or hMLH1 mismatch repair gene alterations. Intriguingly, p53 mutations, which are generally regarded as uncommon in human tumours of the MSI+ phenotype, were frequently associated with Type A instability, whereas none was found in tumours with Type B instability, reflecting the prevailing viewpoint. Inspection of published data reveals that the microsatellite instability that has been observed in various malignancies, including those associated with Hereditary Non-Polyposis Colorectal Cancer (HNPCC), is predominantly Type B. Our findings indicate that Type B instability is not a simple reflection of a repair defect. We suggest that there are at least two qualitatively distinct modes of dinucleotide MSI in human colorectal cancer, and that different molecular mechanisms may underlie these modes of MSI. The relationship between MSI and defective mismatch repair may be more complex than hitherto suspected.

Indexed as

Base Pair MismatchDinucleotide RepeatsDNA RepairAdaptor Proteins, Signal TransducingAnimalsCarrier ProteinsCell LineColorectal NeoplasmsDNA-Binding ProteinsDNA Mutational AnalysisFluorescenceGenes, p53HumansMiceMice, KnockoutMutationAdaptor Proteins, Signal TransducingCarrier ProteinsDNA-Binding ProteinsMLH1 protein, humanMlh1 protein, mouseMSH2 protein, humanMsh2 protein, mouseMutL Protein Homolog 1MutS Homolog 2 ProteinNeoplasm ProteinsNuclear ProteinsProto-Oncogene Proteins

Identifiers

PMID15778432
PMCPMC1067522
OpenAlexW2096682473

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.