Evidence map›Paper›PMID 15774424›Full record

ArticleMolecular biology and evolution2005

Modern mRNA proofreading and repair: clues that the last universal common ancestor possessed an RNA genome?

Anthony M Poole, Derek T Logan

Abstract read
In one paragraph

Article in Molecular biology and evolution, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 82 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
  5. Review
  6. The Codon Usage in the Minimal Natural Cell.Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life · 2021
    Article
  7. Article
  8. Article
  9. A Proposal of the Ur-proteome.Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life · 2018
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. The case for an early biological origin of DNA.Journal of molecular evolution · 2014
    Article
  16. Systems biology perspectives on minimal and simpler cells.Microbiology and molecular biology reviews : MMBR · 2014
    Review
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Anthony M PooleDepartment of Molecular Biology and Functional Genomics, Stockholm University, Stockholm, Sweden. anthony.poole@molbio.su.se
Derek T Logan
Lund University · SEStockholm University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA repair has now been demonstrated to be a genuine biological process and appears to be present in all three domains of life. In this article, we consider what this might mean for the transition from an early RNA-dominated world to modern cells possessing genetically encoded proteins and DNA. There are significant gaps in our understanding of how the modern protein-DNA world could have evolved from a simpler system, and it is currently uncertain whether DNA genomes evolved once or twice. Against this backdrop, the discovery of RNA repair in modern cells is timely food for thought and brings us conceptually one step closer to understanding how RNA genomes were replaced by DNA genomes. We have examined the available literature on multisubunit RNA polymerase structure and function and conclude that a strong case can be made that the Last Universal Common Ancestor (LUCA) possessed a repair-competent RNA polymerase, which would have been capable of acting on an RNA genome. However, while this lends credibility to the proposal that the LUCA had an RNA genome, the alternative, that LUCA had a DNA genome, cannot be completely ruled out.

Indexed as

Evolution, MolecularGenomeSelection, GeneticBiological EvolutionDNA-Directed RNA PolymerasesDNA RepairModels, GeneticModels, MolecularModels, TheoreticalRNARNA EditingRNA, MessengerRNA Processing, Post-TranscriptionalDNA-Directed RNA PolymerasesRNARNA, Messenger

Identifiers

PMID15774424
PMCPMC7107533
OpenAlexW2028209928

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.