Evidence map›Paper›PMID 15767686›Full record

ArticleMolecular and cellular biology2005

Potential autoregulation of transcription factor PU.1 by an upstream regulatory element.

Yutaka Okuno, Gang Huang, Frank Rosenbauer, Erica K Evans, Hanna S Radomska, Hiromi Iwasaki, Koichi Akashi, Francoise Moreau-Gachelin, Youlin Li, Pu Zhang and 2 more

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 103 papers.

0numbers the graph read from it
0cells of the map it votes in
103citing papers in PubMed
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

103 citing papers in PubMed, 173 citations in OpenAlex.

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43 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 4 countries.

Yutaka OkunoHarvard Institutes of Medicine, Room 954, 77 Ave. Louis Pasteur, Boston, MA 02115, USA.
Gang Huang
Frank Rosenbauer
Erica K Evans
Hanna S Radomska
Hiromi Iwasaki
Koichi Akashi
Francoise Moreau-Gachelin
Youlin Li
Pu Zhang
Berthold Göttgens
Daniel G Tenen
Harvard University · USInserm · FRKumamoto University · JPUniversity of Cambridge · GB

Funding

MOLECULAR BIOLOGY OF MYELOID DIFFERENTIATIONR01CA041456 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI TENEN, DANIEL G · 1986 to 2010
$4.6M
C/EBPalpha-mediated therapy for acute myeloid leukemiaK01DK062064 · NIDDK · BETH ISRAEL DEACONESS MEDICAL CENTER · PI RADOMSKA, HANNA S · 2002 to 2004
$342k
NCI NIH HHS CA41456NCI NIH HHS R01 CA041456NIDDK NIH HHS DK62064NIDDK NIH HHS K01 DK062064
6 · The paper itself

Abstract

Regulation of the hematopoietic transcription factor PU.1 (Spi-1) plays a critical role in the development of white cells, and abnormal expression of PU.1 can lead to leukemia. We previously reported that the PU.1 promoter cannot induce expression of a reporter gene in vivo, and cell-type-specific expression of PU.1 in stable lines was conferred by a 3.4-kb DNA fragment including a DNase I hypersensitive site located 14 kb upstream of the transcription start site. Here we demonstrate that this kb -14 site confers lineage-specific reporter gene expression in vivo. This kb -14 upstream regulatory element contains two 300-bp regions which are highly conserved in five mammalian species. In Friend virus-induced erythroleukemia, the spleen focus-forming virus integrates into the PU.1 locus between these two conserved regions. DNA binding experiments demonstrated that PU.1 itself and Elf-1 bind to a highly conserved site within the proximal homologous region in vivo. A mutation of this site abolishing binding of PU.1 and Elf-1 led to a marked decrease in the ability of this upstream element to direct activity of reporter gene in myelomonocytic cell lines. These data suggest that a potential positive autoregulatory loop mediated through an upstream regulatory element is essential for proper PU.1 gene expression.

Indexed as

AnimalsBase SequenceBinding SitesB-LymphocytesCell LineageGene Expression RegulationHumansMiceMice, TransgenicMolecular Sequence DataMutationMyeloid CellsOrgan SpecificityProto-Oncogene ProteinsProto-Oncogene Protein Spi-1Response ElementsProto-Oncogene ProteinsProto-Oncogene Protein Spi-1Trans-Activators

Identifiers

PMID15767686
PMCPMC1061634
OpenAlexW2172259327

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.