Evidence map›Paper›PMID 15767681›Full record

ArticleMolecular and cellular biology2005

Schizosaccharomyces pombe Swi1, Swi3, and Hsk1 are components of a novel S-phase response pathway to alkylation damage.

Elena Sommariva, Till K Pellny, Nilay Karahan, Sanjay Kumar, Joel A Huberman, Jacob Z Dalgaard

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 81 citations in OpenAlex.

  1. Article
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  6. Genes · 2020
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  8. Timeless protection of telomeres.Current genetics · 2016
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  12. Article
  13. Linking chromosome duplication and segregation via sister chromatid cohesion.Methods in molecular biology (Clifton, N.J.) · 2014
    Review
  14. Review
  15. Article
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  17. Human Tim-Tipin complex affects the biochemical properties of the replicative DNA helicase and DNA polymerases.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Elena SommarivaMarie Curie Research Institute, The Chart, Oxted, Surrey RH8 0TL, United Kingdom.
Till K Pellny
Nilay Karahan
Sanjay Kumar
Joel A Huberman
Jacob Z Dalgaard
Marie Curie · GBCancer Genetics (United States) · USRoswell Park Comprehensive Cancer Center · US

Funding

Two-Spirit Films in Indigenous Cancer HealthP30CA016056 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI MARK G FRATTINI · 1985 to 2026
$116.6M
Cis-and trans-acting determinants of replication timingR01CA095908 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI HUBERMAN, JOEL A · 2002 to 2006
$1.9M
CIS-ACTING DETERMINANTS OF REPLICATION TIMINGR21CA084302 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI HUBERMAN, JOEL A · 2000 to 2001
$577k
NCI NIH HHS CA84302NCI NIH HHS CA95908NCI NIH HHS P30 CA016056NCI NIH HHS P30CA16056NCI NIH HHS R01 CA095908NIGMS NIH HHS GM49294
6 · The paper itself

Abstract

The Swi1 and Swi3 proteins are required for mat1 imprinting and mating-type switching in Schizosaccharomyces pombe, where they mediate a pause of leading-strand replication in response to a lagging-strand signal. In addition, Swi1 has been demonstrated to be involved in the checkpoint response to stalled replication forks, as was described for the Saccharomyces cerevisiae homologue Tof1. This study addresses the roles of Swi1 and Swi3 during a replication process perturbed by the presence of template bases alkylated by methyl methanesulfonate (MMS). Both the swi1 and swi3 mutations have additive effects on MMS sensitivity and on the MMS-induced damage checkpoint response when combined with chk1 and cds1, but they are nonadditive with hsk1. Cells with swi1, swi3, or hsk1 mutations are also defective in slowing progression through S phase in response to MMS damage. Moreover, swi1 and swi3 strains show increased levels of genomic instability even in the absence of exogenously induced DNA damage. Chromosome fragmentation, increased levels of single-stranded DNA, increased recombination, and instability of replication forks stalled in the presence of hydroxyurea are observed, consistent with the possibility that the replication process is affected in these mutants. In conclusion, Swi1, Swi3, and Hsk1 act in a novel S-phase checkpoint pathway that contributes to replication fork maintenance and to survival of alkylation damage.

Indexed as

DNA DamageS PhaseAlkylationCell Cycle ProteinsDNA-Binding ProteinsDNA, FungalDNA, Single-StrandedGenome, FungalGenomic InstabilityHydroxyureaMethyl MethanesulfonateMitosisMutationProtein BindingProtein Serine-Threonine KinasesSchizosaccharomycesCell Cycle ProteinsDNA-Binding ProteinsDNA, FungalDNA, Single-StrandedHSK1 protein, S pombeHydroxyureaMethyl MethanesulfonateProtein Serine-Threonine KinasesSchizosaccharomyces pombe Proteinsswi1 protein, S pombeSwi3 protein, S pombeTranscription Factors

Identifiers

PMID15767681
PMCPMC1061638
OpenAlexW2085291169

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.