Evidence map›Paper›PMID 15767669›Full record

ArticleMolecular and cellular biology2005

TATA-binding protein (TBP)-like factor (TLF) is a functional regulator of transcription: reciprocal regulation of the neurofibromatosis type 1 and c-fos genes by TLF/TRF2 and TBP.

Jayhong A Chong, Magdalene M Moran, Martin Teichmann, J Stefan Kaczmarek, Robert Roeder, David E Clapham

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
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  3. Review
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  5. Deletion of the whole NF1 gene in a three-generation family with neurofibromatosis type 1.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2022
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  12. Review
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  19. dTrf2 is required for transcriptional and developmental responses to ecdysone during Drosophila metamorphosis.Developmental dynamics : an official publication of the American Association of Anatomists · 2007
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Jayhong A ChongDepartment of Cardiology, Children's Hospital, Enders 1309, 320 Longwood Ave., Boston, MA 02115, USA.
Magdalene M Moran
Martin Teichmann
J Stefan Kaczmarek
Robert Roeder
David E Clapham
Children's Hospital · TNRockefeller University · USHarvard University · US

Funding

MOLECULAR BASIS OF CELL GROWTH AND TRANSFORMATIONR35CA042567 · NCI · ROCKEFELLER UNIVERSITY · PI ROEDER, ROBERT G · 1986 to 1999
–
NCI NIH HHS CA42567
6 · The paper itself

Abstract

The lack of direct targets for TATA-binding protein (TBP)-like factors (TLFs) confounds the understanding of their role in gene expression. Here we report that human TLF (also called TBP-related factor 2 [TRF2]) activates a number of different genes, including the neurofibromatosis type 1 (NF1) gene. The overexpression of TLF increases the amount of NF1 mRNA in cells. In vivo, TLF binds to and upregulates transcription from a fragment of the NF1 promoter. In vitro, purified TLF-TFIIA binds directly to the same NF1 promoter fragment that is required for TLF responsiveness in cells. Furthermore, targeted deletion of TLF in mice reduces NF1 levels. In contrast, TLF inhibits transcription driven by a fragment from the TATA-containing c-fos promoter by sequestering TFIIA. TBP affects the NF1 and c-fos promoters in a manner reciprocal to that of TLF, stimulating the c-fos promoter and inhibiting NF1 transcription. We conclude that TLF is a functional regulator of transcription with targets distinct from those of TBP.

Indexed as

Genes, Neurofibromatosis 1Amino Acid SequenceAnimalsBase SequenceCell LineChlorocebus aethiopsGene Expression RegulationHumansMiceMolecular Sequence DataPromoter Regions, GeneticProtein BindingProto-Oncogene Proteins c-fosTATA-Box Binding ProteinTATA Box Binding Protein-Like ProteinsTranscription, GeneticProto-Oncogene Proteins c-fosTATA-Box Binding ProteinTATA Box Binding Protein-Like ProteinsTBPL1 protein, human

Identifiers

PMID15767669
PMCPMC1061635
OpenAlexW2123988402

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.