Evidence map›Paper›PMID 15767462›Full record

ArticleThe Journal of cell biology2005

Inhibition of NGF deprivation-induced death by low oxygen involves suppression of BIMEL and activation of HIF-1.

Liang Xie, Randall S Johnson, Robert S Freeman

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
  2. Article
  3. EglN3 hydroxylase stabilizes BIM-EL linking VHL type 2C mutations to pheochromocytoma pathogenesis and chemotherapy resistance.Proceedings of the National Academy of Sciences of the United States of America · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Liang XieDepartment of Pharmacology and Physiology, University of Rochester School of Medicine, Rochester, NY 14642, USA.
Randall S Johnson
Robert S Freeman
University of Rochester · USUniversity of California, San Diego · US

Funding

INVOLVEMENT OF CELL CYCLE REGULATORS IN NEURONAL DEATHR01NS034400 · NINDS · UNIVERSITY OF ROCHESTER · PI FREEMAN, ROBERT S · 1995 to 2008
$2.3M
Mechanisms of Neurotrophin dependent SurvivalR01NS042224 · NINDS · UNIVERSITY OF ROCHESTER · PI FREEMAN, ROBERT S · 2001 to 2005
$1.6M
Genes that Regulate Neuronal Cell DeathR56NS034400 · NINDS · UNIVERSITY OF ROCHESTER · PI FREEMAN, ROBERT S · 2009 to 2009
$358k
NINDS NIH HHS NS34400NINDS NIH HHS NS42224NINDS NIH HHS R01 NS034400NINDS NIH HHS R01 NS042224NINDS NIH HHS R56 NS034400
6 · The paper itself

Abstract

Changes in O(2) tension can significantly impact cell survival, yet the mechanisms underlying these effects are not well understood. Here, we report that maintaining sympathetic neurons under low O(2) inhibits apoptosis caused by NGF deprivation. Low O(2) exposure blocked cytochrome c release after NGF withdrawal, in part by suppressing the up-regulation of BIM(EL). Forced BIM(EL) expression removed the block to cytochrome c release but did not prevent protection by low O(2). Exposing neurons to low O(2) also activated hypoxia-inducible factor (HIF) and expression of a stabilized form of HIF-1alpha (HIF-1alpha(PP-->AG)) inhibited cell death in normoxic, NGF-deprived cells. Targeted deletion of HIF-1alpha partially suppressed the protective effect of low O(2), whereas deletion of HIF-1alpha combined with forced BIM(EL) expression completely reversed the ability of low O(2) to inhibit cell death. These data suggest a new model for how O(2) tension can influence apoptotic events that underlie trophic factor deprivation-induced cell death.

Indexed as

DNA-Binding ProteinsNuclear ProteinsTranscription FactorsAnimalsAnimals, NewbornApoptosisCaspasesCell DeathCell HypoxiaCells, CulturedCell SurvivalChlorocebus aethiopsCOS CellsCytochrome c GroupFluorescent Antibody Technique, IndirectGanglia, SympatheticCaspasesc-jun N-terminal kinase Bim(EL), ratCytochrome c GroupDNA-Binding ProteinsHif1a protein, mouseHif1a protein, ratHypoxia-Inducible Factor 1Hypoxia-Inducible Factor 1, alpha SubunitJNK Mitogen-Activated Protein KinasesLuciferasesNerve Growth FactorNuclear ProteinsTranscription Factors

Identifiers

PMID15767462
PMCPMC2171791
OpenAlexW1963674319

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.