Evidence map›Paper›PMID 15767276›Full record

ArticleNucleic acids research2005

Identification of the 'NORE' (N-Oct-3 responsive element), a novel structural motif and composite element.

Robert Alazard, Magali Blaud, Shmouel Elbaz, Christine Vossen, Guillaume Icre, Gérard Joseph, Laurence Nieto, Monique Erard

Abstract read
In one paragraph

Article in Nucleic acids research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Robert AlazardInstitut de Pharmacologie et de Biologie Structurale UMR 5089, 205 Route de Narbonne, 31077 Toulouse Cedex 4, France.
Magali Blaud
Shmouel Elbaz
Christine Vossen
Guillaume Icre
Gérard Joseph
Laurence Nieto
Monique Erard

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

N-Oct-3 is a neuronal transcription factor widely expressed in the developing mammalian central nervous system, and necessary to maintain neural cell differentiation. The key role of N-Oct-3 in the transcriptional regulation of a multiplicity of genes is primarily due to the structural plasticity of its so-called 'POU' (acronym of Pit, Oct, Unc) DNA-binding domain. We have recently reported about the unusual dual neuro-specific transcriptional regulation displayed by N-Oct-3 [Blaud,M., Vossen,C., Joseph,G., Alazard,R., Erard,M. and Nieto,L. (2004) J. Mol. Biol., 339, 1049-1058]. To elucidate the underlying molecular mechanisms, we have now made use of molecular modeling, DNA footprinting and electrophoretic mobility shift assay techniques. This combined approach has allowed us to uncover a novel mode of homodimerization adopted by the N-Oct-3 POU domain bound to the neuronal aromatic amino acids de-carboxylase and corticotropin-releasing hormone gene promoters and to demonstrate that this pattern is induced by a structural motif that we have termed 'NORE' (N-Oct-3 responsive element), comprising the 14 bp sequence element TNNRTAAATAATRN. In addition, we have been able to explain how the same structural motif can also induce the formation of a heterodimer in association with hepatocyte nuclear factor 3beta(/Forkhead box a2). Finally, we discuss the possible role of the NORE motif in relation to neuroendocrine lung tumor formation, and in particular the development of small cell lung cancer.

Indexed as

Response ElementsAmino Acid MotifsAnimalsAromatic-L-Amino-Acid DecarboxylasesBase SequenceBinding SitesCarcinoma, Small CellCorticotropin-Releasing HormoneDimerizationDNA-Binding ProteinsDNA FootprintingHepatocyte Nuclear Factor 3-betaHumansLung NeoplasmsModels, MolecularNeuronsAromatic-L-Amino-Acid DecarboxylasesCorticotropin-Releasing HormoneDNA-Binding ProteinsFOXA2 protein, humanFoxa2 protein, ratHepatocyte Nuclear Factor 3-betaNuclear ProteinsOctamer Transcription Factor-3POU5F1 protein, humanTranscription Factors

Identifiers

PMID15767276
PMCPMC1065252

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.