Evidence map›Paper›PMID 15754189›Full record

ArticlePlanta2005

Cloning and characterization of an HDZip I gene GmHZ1 from soybean.

Yong-Jun Wang, Yi-Dan Li, Guang-Zuo Luo, Ai-Guo Tian, Hui-Wen Wang, Jin-Song Zhang, Shou-Yi Chen

Abstract read
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In one paragraph

Article in Planta, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 31 citations in OpenAlex.

  1. Overexpression ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  2. BjuWRR1, a CC-NB-LRR gene identified in Brassica juncea, confers resistance to white rust caused by Albugo candida.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
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  10. Review
  11. Cloning and comparative analysis of the gene encoding diacylglycerol acyltransferase from wild type and cultivated soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2006
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yong-Jun WangThe National Plant Gene Reasearch Center (Beijing), National Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, 100101, China.
Yi-Dan Li
Guang-Zuo Luo
Ai-Guo Tian
Hui-Wen Wang
Jin-Song Zhang
Shou-Yi Chen
Chinese Academy of Sciences · CNState Key Laboratory of Plant Genomics · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

By using cDNA-AFLP, we analyzed a recombinant inbred line population of soybean that was derived from a soybean mosaic virus (SMV) resistant cultivar Kefeng No.1 and a susceptible cultivar Nannong 1138-2. One hundred and eight fragments showing polymorphism between SMV resistant and susceptible pools were identified. One fragment w27 was 96 bp in length and showed homology to homeobox ggth with a coding region of 738 bp, encoding a protein of 245 amino acids. The genomic sequence analysis defined an intron of 521 bp in the coding region. GmHZ1 was characterized by the presence of a homeodomain (HD) with a closely linked leucine zipper motif (Zip). Southern blot analysis indicated that there was a single copy of GmHZ1 in the soybean genome. When inoculated with SMV strain N3, resistant and susceptible varieties showed reduced and increased expression of the GmHZ1, respectively. The fusion protein of GmHZ1 with GFP was targeted only in nucleus. Yeast two hybrid studies revealed that the GmHZ1 had transcriptional activation activity and can form homodimer. GmHZ1 can bind two 9-bp pseudopalindromic elements (CAAT(A/T)ATTG and CAAT(C/G)ATTG) with different affinity. Using GUS as a reporter gene, GmHZ1 was proved to be a transcriptional activator and enhanced GUS expression by binding with the two elements in plant cells. These results indicate that the GmHZ1 may have a transcriptional activator function in plant response to SMV infection.

Indexed as

Amino Acid SequenceBase SequenceCloning, MolecularGene Expression Regulation, PlantGenes, PlantGlycine maxHomeodomain ProteinsLeucine ZippersMolecular Sequence DataPhylogenyPlant ProteinsSequence AlignmentSequence Homology, Amino AcidTranscriptional ActivationTranscription, GeneticHomeodomain ProteinsPlant Proteins

Identifiers

PMID15754189
OpenAlexW2063914695

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.