Evidence map›Paper›PMID 15744502›Full record

ArticleMolecular genetics and genomics : MGG2005

Characterization of a mitochondrially targeted single-stranded DNA-binding protein in Arabidopsis thaliana.

Andrew C Edmondson, Daqing Song, Luis A Alvarez, Melisa K Wall, David Almond, David A McClellan, Anthony Maxwell, Brent L Nielsen

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Molecular genetics and genomics : MGG, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Article
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  4. Assembly of the Complete Mitochondrial Genome ofInternational journal of molecular sciences · 2023
    Article
  5. Telomerase Interaction Partners-Insight from Plants.International journal of molecular sciences · 2021
    Article
  6. Review
  7. Mitochondrial DNA Repair in anPlants (Basel, Switzerland) · 2020
    Article
  8. DNA Repair and the Stability of the Plant Mitochondrial Genome.International journal of molecular sciences · 2020
    Review
  9. Biolistic Approach for Transient Gene Expression Studies in Plants.Methods in molecular biology (Clifton, N.J.) · 2020
    Review
  10. Review
  11. Plant Organelle Genome Replication.Plants (Basel, Switzerland) · 2019
    Review
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Andrew C EdmondsonDepartment of Microbiology and Molecular Biology, Brigham Young University, 775 WIDB, Provo, UT, 84602, USA.
Daqing Song
Luis A Alvarez
Melisa K Wall
David Almond
David A McClellan
Anthony Maxwell
Brent L Nielsen
Brigham Young University · USJohn Innes Centre · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/J/00000201
6 · The paper itself

Abstract

A gene encoding a predicted mitochondrially targeted single-stranded DNA binding protein (mtSSB) was identified in the Arabidopsis thaliana genome sequence. This gene (At4g11060) codes for a protein of 201 amino acids, including a 28-residue putative mitochondrial targeting transit peptide. Protein sequence alignment shows high similarity between the mtSSB protein and single-stranded DNA binding proteins (SSB) from bacteria, including residues conserved for SSB function. Phylogenetic analysis indicates a close relationship between this protein and other mitochondrially targeted SSB proteins. The predicted targeting sequence was fused with the GFP coding region, and the organellar localization of the expressed fusion protein was determined. Specific targeting to mitochondria was observed in in-vitro import experiments and by transient expression of a GFP fusion construct in Arabidopsis leaves after microprojectile bombardment. The mature mtSSB coding region was overexpressed in Escherichia coli and the protein was purified for biochemical characterization. The purified protein binds single-stranded, but not double-stranded, DNA. MtSSB stimulates the homologous strand-exchange activity of E. coli RecA. These results indicate that mtSSB is a functional homologue of the E. coli SSB, and that it may play a role in mitochondrial DNA recombination.

Indexed as

PhylogenyAmino Acid SequenceArabidopsisBiolisticsComputational BiologyDNA-Binding ProteinsEscherichia coliGene ComponentsGreen Fluorescent ProteinsLikelihood FunctionsMitochondriaModels, GeneticMolecular Sequence DataRec A RecombinasesSequence AlignmentSequence Analysis, ProteinDNA-Binding ProteinsGreen Fluorescent ProteinsRec A Recombinases

Identifiers

PMID15744502
OpenAlexW2077609586

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.