Evidence map›Paper›PMID 15735733›Full record

ArticleOncogene2005

Microsatellite instability of selective target genes in HNPCC-associated colon adenomas.

Stefan M Woerner, Matthias Kloor, Annegret Mueller, Josef Rueschoff, Nicolaus Friedrichs, Reinhard Buettner, Moriz Buzello, Peter Kienle, Hanns-Peter Knaebel, Erdmute Kunstmann and 7 more

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 83 citations in OpenAlex.

  1. Review
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  11. Nucleic Acid Sensors and Programmed Cell Death.Journal of molecular biology · 2020
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  12. Immune Activation in Mismatch Repair-Deficient Carcinogenesis: More Than Just Mutational Rate.Clinical cancer research : an official journal of the American Association for Cancer Research · 2020
    Review
  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 1 country.

Stefan M WoernerInstitute of Molecular Pathology, University of Heidelberg, Germany.
Matthias Kloor
Annegret Mueller
Josef Rueschoff
Nicolaus Friedrichs
Reinhard Buettner
Moriz Buzello
Peter Kienle
Hanns-Peter Knaebel
Erdmute Kunstmann
Constanze Pagenstecher
Hans K Schackert
Gabriela Möslein
Holger Vogelsang
Magnus von Knebel Doeberitz
Johannes F Gebert
German HNPCC Consortium
Heidelberg University · DEUniversity Hospital Bonn · DEHeinrich Heine University Düsseldorf · DEKlinikum Kassel · DETU Dresden · DEUniversitätsklinikum Knappschaftskrankenhaus Bochum · DEUniversity of Göttingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microsatellite instability (MSI) occurs in most hereditary nonpolyposis colorectal cancers (HNPCC) and less frequently in sporadic tumors as the result of DNA mismatch repair (MMR) deficiency. Instability at coding microsatellites (cMS) in specific target genes causes frameshift mutations and functional inactivation of affected proteins, thereby providing a selective growth advantage to MMR deficient cells. At present, little is known about Selective Target Gene frameshift mutations in preneoplastic lesions. In this study, we examined 30 HNPCC-associated MSI-H colorectal adenomas of different grades of dysplasia for frameshift mutations in 26 cMS-bearing genes, which, according to our previous model, represent Selective Target genes of MSI. About 30% (8/26) of these genes showed a high mutation frequency (> or =50%) in colorectal adenomas, similar to the frequencies reported for colorectal carcinomas. Mutations in one gene (PTHL3) occurred significantly less frequently in MSI adenomas compared to published mutation rates in MSI carcinomas (36.0 vs 85.7%, P=0.023). Biallelic inactivation was observed in nine genes, thus emphasizing the functional impact of cMS instability on MSI tumorigenesis. Some genes showed a high frequency of frameshift mutations already at early stages of MSI colorectal tumorigenesis that increased with grade of dysplasia and transition to carcinoma. These include known Target Genes like BAX and TGFBR2, as well as three novel candidates, MACS, NDUFC2, and TAF1B. Overall, we have identified genes of potential relevance for the initiation and progression of MSI tumorigenesis, thus representing promising candidates for novel diagnostic and therapeutic approaches directed towards MMR-deficient tumors.

Indexed as

Chromosomal InstabilityMicrosatellite RepeatsAdenomaCell Transformation, NeoplasticColonic NeoplasmsColorectal Neoplasms, Hereditary NonpolyposisDNA DamageDNA Mutational AnalysisDNA RepairFrameshift MutationHumansImmunohistochemistryOncogenes

Identifiers

PMID15735733
OpenAlexW2133406385

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.