Evidence map›Paper›PMID 15731081›Full record

ArticleInfection and immunity2005

Use of genome-wide expression profiling and mutagenesis to study the intestinal lifestyle of Campylobacter jejuni.

Alain Stintzi, Denver Marlow, Kiran Palyada, Hemant Naikare, Roger Panciera, Lisa Whitworth, Cyril Clarke

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
21.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 128 citations in OpenAlex.

  1. Article
  2. Review
  3. RevisitingFrontiers in cellular and infection microbiology · 2020
    Review
  4. The Anti-Microorganisms · 2019
    Article
  5. Survival Mechanisms ofFrontiers in microbiology · 2019
    Article
  6. Review
  7. RNAseq Reveals Complex Response ofFrontiers in microbiology · 2017
    Article
  8. Phenotypic and Transcriptomic Responses ofFrontiers in microbiology · 2017
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Alain StintziDepartment of Veterinary Pathobiology, College of Veterinary Medicine, Oklahoma State University, Stillwater, OK 74078, USA. stintzi@cvm.okstate.edu
Denver Marlow
Kiran Palyada
Hemant Naikare
Roger Panciera
Lisa Whitworth
Cyril Clarke
Oklahoma State University · US

Funding

USE OF 16S RIBOSOMAL DNA SEQUENCING TO EVALUATE NGUP20RR015564 · NCRR · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI LANG, MARK L · 2000 to 2009
$18.5M
Campylobacter colonization and virulence determinantsR01AI055612 · NIAID · UNIVERSITY OF OTTAWA · PI STINTZI, ALAIN C · 2003 to 2007
$1.1M
NCRR NIH HHS P20 RR015564NCRR NIH HHS RR15564NIAID NIH HHS AI055612NIAID NIH HHS R01 AI055612
6 · The paper itself

Abstract

Campylobacter jejuni is the most common bacterial cause of diarrhea worldwide. To colonize the gut and cause infection, C. jejuni must successfully compete with endogenous microbes for nutrients, resist host defenses, persist in the intestine, and ultimately infect the host. These challenges require the expression of a battery of colonization and virulence determinants. In this study, the intestinal lifestyle of C. jejuni was studied using whole-genome microarray, mutagenesis, and a rabbit ileal loop model. Genes associated with a wide range of metabolic, morphological, and pathological processes were expressed in vivo. The in vivo transcriptome of C. jejuni reflected its oxygen-limited, nutrient-poor, and hyperosmotic environment. Strikingly, the expression of several C. jejuni genes was found to be highly variable between individual rabbits. In particular, differential gene expression suggested that C. jejuni extensively remodels its envelope in vivo by differentially expressing its membrane proteins and by modifying its peptidoglycan and glycosylation composition. Furthermore, mutational analysis of seven genes, hspR, hrcA, spoT, Cj0571, Cj0178, Cj0341, and fliD, revealed an important role for the stringent and heat shock response in gut colonization. Overall, this study provides new insights on the mechanisms of gut colonization, as well as possible strategies employed by Campylobacter to resist or evade the host immune responses.

Indexed as

Gene Expression ProfilingGenome, BacterialMutagenesisAnimalsBacterial ProteinsCampylobacter InfectionsCampylobacter jejuniDisease Models, AnimalGastroenteritisGene Expression Regulation, BacterialHumansIleumIntestinesOligonucleotide Array Sequence AnalysisRabbitsVirulenceBacterial Proteins

Identifiers

PMID15731081
PMCPMC1064905
OpenAlexW2123924466

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.