Evidence map›Paper›PMID 15731042›Full record

ArticleInfection and immunity2005

Citrobacter rodentium lifA/efa1 is essential for colonic colonization and crypt cell hyperplasia in vivo.

Jan-Michael A Klapproth, Maiko Sasaki, Melanie Sherman, Brian Babbin, Michael S Donnenberg, Paula J Fernandes, Isabel C A Scaletsky, Daniel Kalman, Asma Nusrat, Ifor R Williams

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 64 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Lymphostatin, a virulence factor of attaching and effacingFrontiers in cellular and infection microbiology · 2022
    Article
  5. Completing the Genome Sequence ofPathogens (Basel, Switzerland) · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Diarrheagenic Escherichia coli.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2016
    Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Jan-Michael A KlapprothDivision of Digestive Diseases, Suite 201, Whitehead Biomedical Research Building, Emory University, 615 Michael St., Atlanta, GA 30345-2173, USA. jklappr@emory.edu
Maiko Sasaki
Melanie Sherman
Brian Babbin
Michael S Donnenberg
Paula J Fernandes
Isabel C A Scaletsky
Daniel Kalman
Asma Nusrat
Ifor R Williams
Emory University · USCentre For Digestive Diseases · AUUniversity of Maryland, Baltimore · USUniversidade Federal de São Paulo · BR

Funding

Emory Epithelial Pathobiology Research Development CenterR24DK064399 · NIDDK · EMORY UNIVERSITY · PI PARKOS, CHARLES A · 2003 to 2012
$5.3M
The eae Gene Cluster of Enteropathogenic E.coliR01AI032074 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI DONNENBERG, MICHAEL S · 1997 to 2012
$3.7M
MOLECULAR BASIS OF LOCALIZED ADHERENCE IN E. COLIR01AI037606 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI DONNENBERG, MICHAEL S · 1995 to 2009
$2.5M
Immunomodulation in infectious diarrheaK08DK062899 · NIDDK · EMORY UNIVERSITY · PI KLAPPROTH, JAN-MICHAEL AXEL · 2003 to 2007
$634k
The eae Gene Cluster of Enteropathogenic E.coliR56AI032074 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI DONNENBERG, MICHAEL S · 2007 to 2007
$375k
EAE GENE CLUSTER OF ENTEROPATHOGENIC E. COLIR29AI032074 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI DONNENBERG, MICHAEL S · 1992 to 1996
–
NIAID NIH HHS AI32074NIAID NIH HHS AI37606NIAID NIH HHS R01 AI032074NIAID NIH HHS R01 AI037606NIAID NIH HHS R56 AI032074NIDDK NIH HHS K08 DK062899NIDDK NIH HHS KO8 DK062899-02NIDDK NIH HHS R24 DK064399NIDDK NIH HHS R24DK64399
6 · The paper itself

Abstract

Previously, we have identified a large gene (lifA, for lymphocyte inhibitory factor A) in enteropathogenic Escherichia coli (EPEC) encoding a protein termed lymphostatin that suppresses cytokine expression in vitro. This protein also functions as an adhesion factor for enterohemorrhagic E. coli (EHEC) and Shiga toxin-producing E. coli and is alternatively known as efa1 (EHEC factor for adherence 1). The lifA/efa1 gene is also present in Citrobacter rodentium, an enteric pathogen that causes a disease termed transmissible murine colonic hyperplasia (TMCH), which induces colitis and massive crypt cell proliferation, in mice. To determine if lifA/efa1 is required for C. rodentium-induced colonic pathology in vivo, three in-frame mutations were generated, disrupting the glycosyltransferase (GlM12) and protease (PrMC31) motifs and a domain in between that does not encode any known activity (EID3). In contrast to infection with wild-type C. rodentium, that with any of the lifA/efa1 mutant strains did not induce weight loss or TMCH. Enteric infection with motif mutants GlM12 and PrM31 resulted in significantly reduced colonization counts during the entire 20-day course of infection. In contrast, EID3 was indistinguishable from the wild type during the initial colonic colonization, but cleared rapidly after day 8 of the infection. The colonic epithelium of all infected mice displayed increased epithelial regeneration. However, significantly increased regeneration was observed by day 20 only in mice infected with the wild-type in comparison to those infected with lifA/efa1 mutant EID3. In summary, lifA/efa1 is a critical gene outside the locus for enterocyte effacement that regulates bacterial colonization, crypt cell proliferation, and epithelial cell regeneration.

Indexed as

AnimalsBacterial ProteinsBacterial ToxinsCitrobacter rodentiumColitisColonEscherichia coli ProteinsFemaleGene Expression Regulation, BacterialHumansHyperplasiaInfantMiceMice, Inbred C57BLMicroscopy, Electron, TransmissionMolecular Sequence DataBacterial ProteinsBacterial ToxinsEfa1 protein, E coliEscherichia coli Proteinslymphostatin protein, E coli

Identifiers

PMID15731042
PMCPMC1064951
OpenAlexW2125590017

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.