Evidence map›Paper›PMID 15722423›Full record

ArticleBiophysical journal2005

Identification of plasma membrane macro- and microdomains from wavelet analysis of FRET microscopy.

Evgeny Kobrinsky, Donald E Mager, Sarah A Bentil, Shin-Ichi Murata, Darrell R Abernethy, Nikolai M Soldatov

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Microdomain organization and frequency-dependence of CREB-dependent transcriptional signaling in heart cells.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2011
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Evgeny KobrinskyNational Institute on Aging, National Institutes of Health, Baltimore, Maryland, USA.
Donald E Mager
Sarah A Bentil
Shin-Ichi Murata
Darrell R Abernethy
Nikolai M Soldatov
National Institutes of Health · USNational Institute on Aging · USUniversity of Yamanashi · JP

Funding

MOLECULAR CORRELATES OF HUMAN CALCIUM CHANNEL REGULATIONZ01AG000294 · NIA · NATIONAL INSTITUTE ON AGING · PI SOLDATOV, NIKOLAI · 2000 to 2008
$2.3M
Molecular Correlates Of Human Ca2+ Channel RegulationZIAAG000294 · NIA · NATIONAL INSTITUTE ON AGING · PI SOLDATOV, NIKOLAI · 2009 to 2009
$1.4M
6 · The paper itself

Abstract

In this study, we sought to characterize functional signaling domains by applying the multiresolution properties of the continuous wavelet transform to fluorescence resonance energy transfer (FRET) microscopic images of plasma membranes. A genetically encoded FRET reporter of protein kinase C (PKC)-dependent phosphorylation was expressed in COS1 cells. Differences between wavelet coefficient matrices revealed several heterogeneous domains (typically ranging from 1 to 5 microm), reflecting the dynamic balance between PKC and phosphatase activity during stimulation with phorbol-12,13-dibutyrate or acetylcholine. The balance in these domains was not necessarily reflected in the overall plasma membrane changes, and observed heterogeneity was absent when cells were exposed to a phosphatase or PKC inhibitor. Prolonged exposure to phorbol-12,13-dibutyrate and acetylcholine yielded more homogeneous FRET distribution in plasma membranes. The proposed wavelet-based image analysis provides, for the first time, a basis and a means of detecting and quantifying dynamic changes in functional signaling domains, and may find broader application in studying fine aspects of cellular signaling by various imaging reporters.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsBacterial ProteinsCell MembraneCOS CellsFluorescence Resonance Energy TransferGenes, ReporterGreen Fluorescent ProteinsImage Processing, Computer-AssistedLuminescent ProteinsModels, StatisticalPhorbol 12,13-DibutyratePhosphoric Monoester HydrolasesPhosphorylationProtein Kinase CProtein Structure, TertiaryAdaptor Proteins, Signal TransducingBacterial ProteinsCyan Fluorescent ProteinGreen Fluorescent ProteinsLuminescent ProteinsPhorbol 12,13-DibutyratePhosphoric Monoester HydrolasesProtein Kinase Cyellow fluorescent protein, Bacteria

Identifiers

PMID15722423
PMCPMC1305509
OpenAlexW2001935994

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.