Evidence map›Paper›PMID 15719211›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2005

Inheritance and genetic mapping of tuber eye depth in cultivated diploid potatoes.

Xiu-Qing Li, Hielke De Jong, Darlene M De Jong, Walter S De Jong

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Fine Mapping and Candidate Gene Prediction of Tuber Shape ControllingInternational journal of molecular sciences · 2022
    Article
  8. Article
  9. Genome sequencing of adapted diploid potato clones.Frontiers in plant science · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. QTL for tuber morphology traits in diploid potato.Journal of applied genetics · 2018
    Article
  15. Automated tetraploid genotype calling by hierarchical clustering.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Article
  16. Genetic mapping with an inbred line-derived F2 population in potato.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016
    Article
  17. Article
  18. Article
  19. Improving breeding efficiency in potato using molecular and quantitative genetics.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Xiu-Qing LiResearch Scientist of Molecular Genetics, Potato Research Center, Agriculture and Agri-Food Canada, P.O. Box 20280, 850 Lincoln Rd., Fredericton, NB, E3B 4Z7, Canada. lixq@agr.gc.ca
Hielke De Jong
Darlene M De Jong
Walter S De Jong
Agriculture and Agri-Food Canada · CACornell University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tuber eye depth of the potato (Solanum tuberosum L.) is an important trait for the processing quality and appearance of potatoes. In the present study, we used a cultivated diploid potato family (12601) of 107 plants to dissect the mode of inheritance and to map the gene(s) controlling the trait. The family segregated for both eye depth (deep vs shallow) and tuber shape (round vs long) traits. The deep eye (Eyd) phenotype was found to be associated with round tubers (Ro) in most progeny clones. Further evaluation of this population with molecular markers including simple sequence repeats, amplified fragment length polymorphism, and sequence-characterized amplified regions revealed that the primary locus for eye depth is located on chromosome 10. This map location was confirmed by evaluating a second diploid family (12586). The results of this study led to the following conclusions: (1) there is a major locus controlling the eye depth trait; (2) deep eye (Eyd) is dominant to shallow (eyd); (3) the Eyd/eyd locus is located on chromosome 10; and (4) the Eyd/eyd locus is closely linked with the major locus for tuber shape (Ro/ro), at a distance of about 4 cM.

Indexed as

Chromosome MappingPhenotypeAgricultureDNA PrimersGenetic LinkageGenetic MarkersInheritance PatternsNucleic Acid Amplification TechniquesPlant TubersPolymorphism, Restriction Fragment LengthSequence Analysis, DNASolanum tuberosumDNA PrimersGenetic Markers

Identifiers

PMID15719211
OpenAlexW2093599808

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.