Evidence map›Paper›PMID 15716503›Full record

ArticleGenetics2005

Identification and characterization of regions of the rice genome associated with broad-spectrum, quantitative disease resistance.

Randall J Wisser, Qi Sun, Scot H Hulbert, Stephen Kresovich, Rebecca J Nelson

Abstract read
In one paragraph

Article in Genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed.

  1. Article
  2. Review
  3. The Role of Genetic Resistance in Rice Disease Management.International journal of molecular sciences · 2025
    Review
  4. Review
  5. Article
  6. Meta-QTL analysis in wheat: progress, challenges and opportunities.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Review
  7. Article
  8. MiR1885 Regulates Disease Tolerance Genes inInternational journal of molecular sciences · 2021
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Pid3-I1 is a race-specific partial-resistance allele at the Pid3 blast resistance locus in rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  17. Molecular Genetics and Breeding for Nutrient Use Efficiency in Rice.International journal of molecular sciences · 2018
    Review
  18. Article
  19. Article
  20. Review

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Randall J WisserDepartment of Plant Breeding and Genetics, Institute for Genomic Diversity, Cornell University, Ithaca, New York 14853, USA. rjn7@cornell.edu
Qi Sun
Scot H Hulbert
Stephen Kresovich
Rebecca J Nelson

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Much research has been devoted to understanding the biology of plant-pathogen interactions. The extensive genetic analysis of disease resistance in rice, coupled with the sequenced genome and genomic resources, provides the opportunity to seek convergent evidence implicating specific chromosomal segments and genes in the control of resistance. Published data on quantitative and qualitative disease resistance in rice were synthesized to evaluate the distributions of and associations among resistance loci. Quantitative trait loci (QTL) for resistance to multiple diseases and qualitative resistance loci (R genes) were clustered in the rice genome. R genes and their analogs of the nucleotide binding site-leucine-rich repeat class and genes identified on the basis of differential representation in disease-related EST libraries were significantly associated with QTL. Chromosomal segments associated with broad-spectrum quantitative disease resistance (BS-QDR) were identified. These segments contained numerous positional candidate genes identified on the basis of a range of criteria, and groups of genes belonging to two defense-associated biochemical pathways were found to underlie one BS-QDR region. Genetic dissection of disease QTL confidence intervals is needed to reduce the number of positional candidate genes for further functional analysis. This study provides a framework for future investigations of disease resistance in rice and related crop species.

Indexed as

Genome, PlantImmunity, InnateBlotting, NorthernChromosome MappingChromosomes, PlantCluster AnalysisDNA, ComplementaryDNA, PlantDown-RegulationExpressed Sequence TagsGene Expression Regulation, PlantGene LibraryGenetic MarkersModels, GeneticModels, StatisticalMutationDNA, ComplementaryDNA, PlantGenetic Markers

Identifiers

PMID15716503
PMCPMC1449593

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.