Evidence map›Paper›PMID 15716439›Full record

ArticleJournal of bacteriology2005

Two novel phycoerythrin-associated linker proteins in the marine cyanobacterium Synechococcus sp. strain WH8102.

Christophe Six, Jean-Claude Thomas, Laurent Thion, Yves Lemoine, Frank Zal, Frédéric Partensky

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 61 citations in OpenAlex.

  1. Competition for light color between marineApplied and environmental microbiology · 2025
    Article
  2. Article
  3. Dual thermal ecotypes coexist within a nearly genetically identical population of the unicellular marine cyanobacteriumProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  4. Article
  5. Article
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  7. Review
  8. Comparative Thermophysiology of MarineFrontiers in microbiology · 2022
    Article
  9. MarineProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Adaptation to Blue Light in MarineFrontiers in microbiology · 2017
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Christophe SixDépartement "Phytoplancton Océanique," Station Biologique, UMR 7127 CNRS & Université Pierre et Marie Curie, BP 74, 29682 Roscoff cedex, France.
Jean-Claude Thomas
Laurent Thion
Yves Lemoine
Frank Zal
Frédéric Partensky
Marie Curie · GBStation Biologique de Roscoff · FRCentre National de la Recherche Scientifique · FRÉcole Normale Supérieure · BI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The recent availability of the whole genome of Synechococcus sp. strain WH8102 allows us to have a global view of the complex structure of the phycobilisomes of this marine picocyanobacterium. Genomic analyses revealed several new characteristics of these phycobilisomes, consisting of an allophycocyanin core and rods made of one type of phycocyanin and two types of phycoerythrins (I and II). Although the allophycocyanin appears to be similar to that found commonly in freshwater cyanobacteria, the phycocyanin is simpler since it possesses only one complete set of alpha and beta subunits and two rod-core linkers (CpcG1 and CpcG2). It is therefore probably made of a single hexameric disk per rod. In contrast, we have found two novel putative phycoerythrin-associated linker polypeptides that appear to be specific for marine Synechococcus spp. The first one (SYNW2000) is unusually long (548 residues) and apparently results from the fusion of a paralog of MpeC, a phycoerythrin II linker, and of CpeD, a phycoerythrin-I linker. The second one (SYNW1989) has a more classical size (300 residues) and is also an MpeC paralog. A biochemical analysis revealed that, like MpeC, these two novel linkers were both chromophorylated with phycourobilin. Our data suggest that they are both associated (partly or totally) with phycoerythrin II, and we propose to name SYNW2000 and SYNW1989 MpeD and MpeE, respectively. We further show that acclimation of phycobilisomes to high light leads to a dramatic reduction of MpeC, whereas the two novel linkers are not significantly affected. Models for the organization of the rods are proposed.

Indexed as

Amino Acid SequenceBacterial ProteinsMolecular Sequence DataPhycobilisomesPhycoerythrinSequence AlignmentSequence Homology, Amino AcidSynechococcusBacterial ProteinsPhycobilisomesPhycoerythrin

Identifiers

PMID15716439
PMCPMC1064003
OpenAlexW2172262258

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.