Evidence map›Paper›PMID 15710614›Full record

ArticleThe Journal of biological chemistry2005

Role of a conserved glutamate residue in the Escherichia coli SecA ATPase mechanism.

Christopher R Zito, Edwin Antony, John F Hunt, Donald B Oliver, Manju M Hingorani

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. The Structure ofInternational journal of molecular sciences · 2020
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Energy transduction in protein transport and the ATP hydrolytic cycle of SecA.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Christopher R ZitoMolecular Biology and Biochemistry Department, Wesleyan University, Middletown, Connecticut 06459, USA.
Edwin Antony
John F Hunt
Donald B Oliver
Manju M Hingorani
Columbia University · US

Funding

Mechanism of Protein Localization in Eschericia coliR01GM042033 · NIGMS · WESLEYAN UNIVERSITY · PI OLIVER, DONALD B. · 1989 to 2010
$3.4M
Enzymology of RFC - an essential DNA metabolic machineR01GM064514 · NIGMS · WESLEYAN UNIVERSITY · PI HINGORANI, MANJU M · 2002 to 2006
$1.0M
NIGMS NIH HHS GM42033NIGMS NIH HHS GM64514NIGMS NIH HHS R01 GM042033NIGMS NIH HHS R01 GM064514
6 · The paper itself

Abstract

Escherichia coli SecA uses ATP to drive the transport of proteins across cell membranes. Glutamate 210 in the "DEVD" Walker B motif of the SecA ATP-binding site has been proposed as the catalytic base for ATP hydrolysis (Hunt, J. F., Weinkauf, S., Henry, L., Fak, J. J., McNicholas, P., Oliver, D. B., and Deisenhofer, J. (2002) Science 297, 2018-2026). Consistent with this hypothesis, we find that mutation of glutamate 210 to aspartate results in a 90-fold reduction of the ATP hydrolysis rate compared with wild type SecA, 0.3 s(-1) versus 27 s(-1), respectively. SecA-E210D also releases ADP at a slower rate compared with wild type SecA, suggesting that in addition to serving as the catalytic base, glutamate 210 might aid turnover as well. Our results contradict an earlier report that proposed aspartate 133 as the catalytic base (Sato, K., Mori, H., Yoshida, M., and Mizushima, S. (1996) J. Biol. Chem. 271, 17439-17444). Re-evaluation of the SecA-D133N mutant used in that study confirms its loss of ATPase and membrane translocation activities, but surprisingly, the analogous SecA-D133A mutant retains full activity, revealing that this residue does not play a key role in catalysis.

Indexed as

Adenosine TriphosphatasesAdenosine TriphosphateAmino Acid SequenceAspartic AcidBacillus subtilisBacterial ProteinsBinding SitesCatalysisCell MembraneDimerizationEscherichia coliGlutamic AcidHydrolysisKineticsMagnesiumMembrane Transport ProteinsAdenosine TriphosphatasesAdenosine TriphosphateAspartic AcidBacterial ProteinsGlutamic AcidMagnesiumMembrane Transport ProteinsPhosphatesSecA ProteinsSEC Translocation Channels

Identifiers

PMID15710614
PMCPMC4684309
OpenAlexW2008875470

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.