Evidence map›Paper›PMID 15703442›Full record

ArticleRNA (New York, N.Y.)2005

Processing bodies require RNA for assembly and contain nontranslating mRNAs.

Daniela Teixeira, Ujwal Sheth, Marco A Valencia-Sanchez, Muriel Brengues, Roy Parker

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 404 papers.

0numbers the graph read from it
0cells of the map it votes in
404citing papers in PubMed
20.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

404 citing papers in PubMed, 718 citations in OpenAlex.

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  20. Biomolecular condensates in immune cell fate.Nature reviews. Immunology · 2025
    Review

344 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Daniela TeixeiraDepartment of Molecular and Cellular Biology & Howard Hughes Medical Institute, University of Arizona, Tucson, AZ 85721-0106, USA.
Ujwal Sheth
Marco A Valencia-Sanchez
Muriel Brengues
Roy Parker
Howard Hughes Medical Institute · US

Funding

mRNA Decapping in YeastR37GM045443 · NIGMS · UNIVERSITY OF COLORADO · PI PARKER, ROY · 2004 to 2013
$3.1M
NIGMS NIH HHS R37 GM045443
6 · The paper itself

Abstract

Recent experiments have defined cytoplasmic foci, referred to as processing bodies (P-bodies), wherein mRNA decay factors are concentrated and where mRNA decay can occur. However, the physical nature of P-bodies, their relationship to translation, and possible roles of P-bodies in cellular responses remain unclear. We describe four properties of yeast P-bodies that indicate that P-bodies are dynamic structures that contain nontranslating mRNAs and function during cellular responses to stress. First, in vivo and in vitro analysis indicates that P-bodies are dependent on RNA for their formation. Second, the number and size of P-bodies vary in response to glucose deprivation, osmotic stress, exposure to ultraviolet light, and the stage of cell growth. Third, P-bodies vary with the status of the cellular translation machinery. Inhibition of translation initiation by mutations, or cellular stress, results in increased P-bodies. In contrast, inhibition of translation elongation, thereby trapping the mRNA in polysomes, leads to dissociation of P-bodies. Fourth, multiple translation factors and ribosomal proteins are lacking from P-bodies. These results suggest additional biological roles of P-bodies in addition to being sites of mRNA degradation.

Indexed as

RNA StabilityCytoplasmic GranulesDEAD-box RNA HelicasesEndoribonucleasesGenotypeGlucoseGreen Fluorescent ProteinsMicroscopy, ConfocalOsmotic PressureProtein BiosynthesisRNA-Binding ProteinsRNA HelicasesRNA, MessengerSaccharomyces cerevisiae ProteinsYeastsDCP2 protein, S cerevisiaeDEAD-box RNA HelicasesDHH1 protein, S cerevisiaeEndoribonucleasesGlucoseGreen Fluorescent ProteinsRNA-Binding ProteinsRNA HelicasesRNA, MessengerSaccharomyces cerevisiae Proteins

Identifiers

PMID15703442
PMCPMC1370727
OpenAlexW2114717251

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.