Evidence map›Paper›PMID 15701761›Full record

ArticleNucleic acids research2005

The p80 homology region of TEP1 is sufficient for its association with the telomerase and vault RNAs, and the vault particle.

Michael J Poderycki, Leonard H Rome, Lea Harrington, Valerie A Kickhoefer

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. The vault RNA ofThe Journal of biological chemistry · 2019
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Structural studies of large nucleoprotein particles, vaults.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2012
    Review
  16. Article
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Michael J PoderyckiDepartment of Biological Chemistry and the Jonsson Comprehensive Cancer Center, The David Geffen School of Medicine at UCLA, 10833 Le Conte Avenue, Los Angeles, CA 90095-1737, USA.
Leonard H Rome
Lea Harrington
Valerie A Kickhoefer
University of California, Los Angeles · US

Funding

GENETIC ANALYSIS OF MAMMALIAN TELOMERASE PROTEINS TEP1R01AG016629 · NIA · ONTARIO CANCER INSTITUTE · PI HARRINGTON, LEA A. · 1999 to 2003
$646k
NIA NIH HHS AG16629-01
6 · The paper itself

Abstract

TEP1 is a protein component of two ribonucleoprotein complexes: vaults and telomerase. The vault-associated small RNA, termed vault RNA (VR), is dependent upon TEP1 for its stable association with vaults, while the association of telomerase RNA with the telomerase complex is independent of TEP1. Both of these small RNAs have been shown to interact with amino acids 1-871 of TEP1 in an indirect yeast three-hybrid assay. To understand the determinants of TEP1-RNA binding, we generated a series of TEP1 deletions and show by yeast three-hybrid assay that the entire Tetrahymena p80 homology region of TEP1 is required for its interaction with both telomerase and VRs. This region is also sufficient to target the protein to the vault particle. Electrophoretic mobility shift assays using the recombinant TEP1 RNA-binding domain (TEP1-RBD) demonstrate that it binds RNA directly, and that telomerase and VRs compete for binding. VR binds weakly to TEP1-RBD in vitro, but mutation of VR sequences predicted to disrupt helices near its central loop enhances binding. Antisense oligonucleotide-directed RNase H digestion of endogenous VR indicates that this region is largely single stranded, suggesting that TEP1 may require access to the VR central loop for efficient binding.

Indexed as

AnimalsBase SequenceCarrier ProteinsCell LineHumansMiceMolecular Sequence DataPhosphate-Binding ProteinsProtein Structure, TertiaryRatsRibonuclease HRNARNA-Binding ProteinsSpodopteraTelomeraseTetrahymenaCarrier ProteinsPhosphate-Binding ProteinsRibonuclease HRNARNA-Binding ProteinsTelomerasetelomerase p80 protein, Tetrahymenatelomerase RNATEP1 protein, humanTep1 protein, mouseTep1 protein, ratVault Ribonucleoprotein Particles

Identifiers

PMID15701761
PMCPMC549401
OpenAlexW2043955666

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.