Evidence map›Paper›PMID 15699145›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2005

Electrostatic modeling predicts the activities of orthopoxvirus complement control proteins.

Georgia Sfyroera, Madan Katragadda, Dimitrios Morikis, Stuart N Isaacs, John D Lambris

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 67 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Georgia SfyroeraDepartment of Pathology and Laboratory Medicine,University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.
Madan Katragadda
Dimitrios Morikis
Stuart N Isaacs
John D Lambris
Emory University Hospital · USUniversity of Pennsylvania · USUniversity of California, Riverside · US

Funding

STRUCTURE-FUNCTION ANALYSIS OF DIFFERENT C3 SPECIESR01AI030040 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI LAMBRIS, JOHN D · 1993 to 2016
$4.1M
VACCINIA B5R PROTEIN IN SPREAD IMMUNE EVASION, VACCINESR01AI047237 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI ISAACS, STUART N. · 2001 to 2005
$1.8M
POXVIRUS SCR-CONTAINING PROTEINS AS THERAPEUTIC TARGETSU01AI048487 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI ISAACS, STUART N. · 2000 to 2003
$1.1M
VIRAL RESPIRATORY PATHOGENS RESEARCH UNIT /VRPRU/-266030040-266030040N01AI030040 · NIAID · UNIVERSITY OF IOWA · PI APICELLA, MICHAEL A. · 2003 to 2006
–
NIAID NIH HHS AI30040NIAID NIH HHS AI47237NIAID NIH HHS AI48487NIAID NIH HHS N01 AI030040NIAID NIH HHS R01 AI030040NIAID NIH HHS R01 AI047237NIAID NIH HHS U01 AI048487
6 · The paper itself

Abstract

Regulation of complement activation by pathogens and the host are critical for survival. Using two highly related orthopoxvirus proteins, the vaccinia and variola (smallpox) virus complement control proteins, which differ by only 11 aa, but differ 1000-fold in their ability to regulate complement activation, we investigated the role of electrostatic potential in predicting functional activity. Electrostatic modeling of the two proteins predicted that altering the vaccinia virus protein to contain the amino acids present in the second short consensus repeat domain of the smallpox protein would result in a vaccinia virus protein with increased complement regulatory activity. Mutagenesis of the vaccinia virus protein confirmed that changing the electrostatic potential of specific regions of the molecule influences its activity and identifies critical residues that result in enhanced function as measured by binding to C3b, inhibition of the alternative pathway of complement activation, and cofactor activity. In addition, we also demonstrate that despite the enhanced activity of the variola virus protein, its cofactor activity in the factor I-mediated degradation of C3b does not result in the cleavage of the alpha' chain of C3b between residues 954-955. Our data have important implications in our understanding of how regulators of complement activation interact with complement, the regulation of the innate immune system, and the rational design of potent complement inhibitors that might be used as therapeutic agents.

Indexed as

Models, MolecularComplement C3b Inactivator ProteinsComplement Inactivator ProteinsComplement Pathway, AlternativeComplement Pathway, ClassicalConsensus SequenceGlutamic AcidHumansLysineOrthopoxvirusPeptide MappingPoint MutationPredictive Value of TestsProtein BindingRepetitive Sequences, Amino AcidStatic ElectricityComplement C3b Inactivator Proteinscomplement-control protein, Vaccinia virusComplement Inactivator ProteinsGlutamic AcidLysineViral Proteins

Identifiers

PMID15699145
PMCPMC4138803
OpenAlexW1938751745

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.