Evidence map›Paper›PMID 15695635›Full record

ArticleBiophysical journal2005

Concentration-dependent realignment of the antimicrobial peptide PGLa in lipid membranes observed by solid-state 19F-NMR.

Ralf W Glaser, Carsten Sachse, Ulrich H N Dürr, Parvesh Wadhwani, Sergii Afonin, Erik Strandberg, Anne S Ulrich

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 151 citations in OpenAlex.

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  8. Concerted Rolling and Penetration of Peptides during Membrane Binding.Journal of chemical theory and computation · 2022
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  19. Biophysical journal · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ralf W GlaserInstitute of Biochemistry and Biophysics, University of Jena, Jena, Germany.
Carsten Sachse
Ulrich H N Dürr
Parvesh Wadhwani
Sergii Afonin
Erik Strandberg
Anne S Ulrich
FZI Research Center for Information Technology · DEKarlsruhe Institute of Technology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The membrane-disruptive antimicrobial peptide PGLa is found to change its orientation in a dimyristoyl-phosphatidylcholine bilayer when its concentration is increased to biologically active levels. The alignment of the alpha-helix was determined by highly sensitive solid-state NMR measurements of (19)F dipolar couplings on CF(3)-labeled side chains, and supported by a nonperturbing (15)N label. At a low peptide/lipid ratio of 1:200 the amphiphilic peptide resides on the membrane surface in the so-called S-state, as expected. However, at high peptide concentration (>/=1:50 molar ratio) the helix axis changes its tilt angle from approximately 90 degrees to approximately 120 degrees , with the C-terminus pointing toward the bilayer interior. This tilted "T-state" represents a novel feature of antimicrobial peptides, which is distinct from a membrane-inserted I-state. At intermediate concentration, PGLa is in exchange between the S- and T-state in the timescale of the NMR experiment. In both states the peptide molecules undergo fast rotation around the membrane normal in liquid crystalline bilayers; hence, large peptide aggregates do not form. Very likely the obliquely tilted T-state represents an antiparallel dimer of PGLa that is formed in the membrane at increasing concentration.

Indexed as

1,2-DipalmitoylphosphatidylcholineAnti-Infective AgentsAntimicrobial Cationic PeptidesBiophysicsCalorimetry, Differential ScanningCarbonCell MembraneComputer SimulationDimerizationDimyristoylphosphatidylcholineDiphenylhexatrieneDose-Response Relationship, DrugFluorescent DyesHydrocarbonsLipid BilayersLipids1,2-DipalmitoylphosphatidylcholineAnti-Infective AgentsAntimicrobial Cationic PeptidesCarbonDimyristoylphosphatidylcholineDiphenylhexatrieneFluorescent DyesHydrocarbonsLipid BilayersLipidspeptide-Gly-Leu-amidePeptides

Identifiers

PMID15695635
PMCPMC1305486
OpenAlexW1999753326

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.