ArticleBMC genomics2005
Development of a cDNA array for chicken gene expression analysis.
Article in BMC genomics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
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Who cites it
17 citing papers in PubMed, 76 citations in OpenAlex.
- A review of genetic variation underlying chicken phenotypic diversity.Poultry science · 2025Review
- Epithelial ovarian cancer experimental models.Oncogene · 2014Review
- SDF-1 chemokine signalling modulates the apoptotic responses to iron deprivation of clathrin-depleted DT40 cells.PloS one · 2014Article
- Notch signaling activation suppresses v-Src-induced transformation of neural cells by restoring TGF-β-mediated differentiation.PloS one · 2010Article
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- Re-annotation is an essential step in systems biology modeling of functional genomics data.PloS one · 2010Article
- Comparing gene annotation enrichment tools for functional modeling of agricultural microarray data.BMC bioinformatics · 2009Article
- ArrayIDer: automated structural re-annotation pipeline for DNA microarrays.BMC bioinformatics · 2009Article
- Development and validation of an oligonucleotide microarray for immuno-inflammatory genes of ruminants.Veterinary research communications · 2008Article
- Myc oncogene-induced genomic instability: DNA palindromes in bursal lymphomagenesis.PLoS genetics · 2008Article
- Molecular mechanisms of primary and secondary mucosal immunity using avian infectious bronchitis virus as a model system.Veterinary immunology and immunopathology · 2008Article
- Characterization of a newly developed chicken 44K Agilent microarray.BMC genomics · 2008Article
- Gallus GBrowse: a unified genomic database for the chicken.Nucleic acids research · 2008Article
- Biomarker discovery in animal health and disease: the application of post-genomic technologies.Biomarker insights · 2007Article
- Construction of a microarray specific to the chicken immune system: profiling gene expression in B cells after lipopolysaccharide stimulation.Canadian journal of veterinary research = Revue canadienne de recherche veterinaire · 2007Article
- Article
- Development of a chicken 5 K microarray targeted towards immune function.BMC genomics · 2006Article
Corrections and comments
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Authors and funding
8 authors at 5 institutions in 3 countries.
Funding
Abstract
backgroundThe application of microarray technology to functional genomic analysis in the chicken has been limited by the lack of arrays containing large numbers of genes.
resultsWe have produced cDNA arrays using chicken EST collections generated by BBSRC, University of Delaware and the Fred Hutchinson Cancer Research Center. From a total of 363,838 chicken ESTs representing 24 different adult or embryonic tissues, a set of 11,447 non-redundant ESTs were selected and added to an existing collection of clones (4,162) from immune tissues and a chicken bursal cell line (DT40). Quality control analysis indicates there are 13,007 useable features on the array, including 160 control spots. The array provides broad coverage of mRNAs expressed in many tissues; in addition, clones with expression unique to various tissues can be detected.
conclusionsA chicken multi-tissue cDNA microarray with 13,007 features is now available to academic researchers from http://genomics@fhcrc.org. Sequence information for all features on the array is in GenBank, and clones can be readily obtained. Targeted users include researchers in comparative and developmental biology, immunology, vaccine and agricultural technology. These arrays will be an important resource for the entire research community using the chicken as a model.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.