ArticleApplied and environmental microbiology2005
Beringian paleoecology inferred from permafrost-preserved fungal DNA.
Article in Applied and environmental microbiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
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Who cites it
24 citing papers in PubMed, 169 citations in OpenAlex.
- soibean: High-Resolution Taxonomic Identification of Ancient Environmental DNA Using Mitochondrial Pangenome Graphs.Molecular biology and evolution · 2024Article
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- Quantitative PCR (qPCR) assay for the specific detection of the Chinese mystery snail (Cipangopaludina chinensis) in the UK.PloS one · 2023Article
- Collapse of the mammoth-steppe in central Yukon as revealed by ancient environmental DNA.Nature communications · 2021Article
- Depth-Dependent Spatiotemporal Dynamics of Overwintering PelagicMicroorganisms · 2021Article
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- Diversity, ecology, and bioprospecting of culturable fungi in lakes impacted by anthropogenic activities in Maritime Antarctica.Extremophiles : life under extreme conditions · 2020Article
- New insights on lake sediment DNA from the catchment: importance of taphonomic and analytical issues on the record quality.Scientific reports · 2019Article
- A multigene phylogeny toward a new phylogenetic classification ofIMA fungus · 2019Article
- Article
- Ecosystem biomonitoring with eDNA: metabarcoding across the tree of life in a tropical marine environment.Scientific reports · 2017Article
- Seasonal variation in environmental DNA in relation to population size and environmental factors.Scientific reports · 2017Article
- A systematic approach to evaluate the influence of environmental conditions on eDNA detection success in aquatic ecosystems.PloS one · 2017Article
- Article
- Fungal burden in waste industry: an occupational risk to be solved.Environmental monitoring and assessment · 2015Article
- Ancient and modern environmental DNA.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2015Review
- Article
- Regeneration of whole fertile plants from 30,000-y-old fruit tissue buried in Siberian permafrost.Proceedings of the National Academy of Sciences of the United States of America · 2012Article
- Detection of a diverse marine fish fauna using environmental DNA from seawater samples.PloS one · 2012Article
- Evolutionary history of Serpulaceae (Basidiomycota): molecular phylogeny, historical biogeography and evidence for a single transition of nutritional mode.BMC evolutionary biology · 2011Article
Corrections and comments
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Authors and funding
8 authors at 4 institutions in 5 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The diversity of fungi in permanently frozen soil from northeastern Siberia was studied by culture-independent PCR amplification of diverse environmental 18S rRNA genes. Elaborate protocols to avoid contamination during drilling, sampling, and amplification were used. A broad diversity of eukaryotic DNA sequences that were 510 bp long, including sequences of various fungi, plants, and invertebrates, could be obtained reproducibly from samples that were up to 300,000 to 400,000 years old. The sequences revealed that ancient fungal communities included a diversity of cold-adapted yeasts, dark-pigmented fungi, plant-parasitic fungi, and lichen mycobionts. DNA traces of tree-associated macrofungi in a modern tundra sample indicated that there was a shift in fungal diversity following the last ice age and supported recent results showing that there was a severe change in the plant composition in northeastern Siberia during this period. Interestingly, DNA sequences with high homology to sequences of coprophilic and keratinophilic fungi indicated that feces, hair, skin, and nails could have been sources of ancient megafauna DNA recently reported to be present in small amounts of Siberian permafrost sediments.
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