Evidence map›Paper›PMID 15691915›Full record

ArticleApplied and environmental microbiology2005

Presence and persistence of Legionella spp. in groundwater.

Joana Costa, Igor Tiago, Milton S da Costa, António Veríssimo

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Article
  2. Occurrence of UnculturedPathogens (Basel, Switzerland) · 2024
    Article
  3. Article
  4. Article
  5. Presence of Viable, Clinically RelevantMicrobiology spectrum · 2022
    Article
  6. Microorganisms · 2021
    Review
  7. Identification and Characterization ofPlants (Basel, Switzerland) · 2021
    Article
  8. Article
  9. The Impact of Storms onFrontiers in microbiology · 2020
    Article
  10. Article
  11. Article
  12. Differences in Virulence BetweenFrontiers in cellular and infection microbiology · 2018
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Joana CostaDepartamento de Zoologia and Centro de Neurociências e Biologia Celular, Universidade de Coimbra, 3004-517 Coimbra, Portugal.
Igor Tiago
Milton S da Costa
António Veríssimo

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Groundwater samples (111) from six different boreholes located in two geographical areas were examined for the presence of legionellae over a 7-year period. The number of Legionella isolates detected was generally low. The colonization of the aquifers was not uniform, and the persistence of Legionella was independent of the hydraulic pumps and the plumbing system present in the borehole. A total of 374 isolates identified by fatty acid methyl ester analysis belonged to Legionella pneumophila, L. oakridgensis, L. sainthelensi, and L. londiniensis. In area 1, L. oakridgensis constituted the major population detected, exhibiting only one random amplified polymorphic DNA (RAPD)-PCR profile. L. sainthelensi strains were less frequently isolated and also displayed a single RAPD profile, while L. pneumophila was only sporadically detected. In contrast, L. pneumophila comprised the vast majority of the isolates in area 2 and exhibited six distinct RAPD patterns, indicating the presence of different genetic groups; three L. londiniensis RAPD types were also detected. Two of the L. pneumophila and one of the L. londiniensis RAPD types were persistent in this environment for at least 12 years. The genetic structure of L. pneumophila groundwater populations, inferred from rpoB and dotA gene sequences, was peculiar, since the majority of the isolates were allied in a discrete group different from the lineages containing most of the type and reference strains of the three subspecies of L. pneumophila. Furthermore, gene exchange events related to the dotA allele could be envisioned.

Indexed as

Bacterial ProteinsCarrier ProteinsDNA, BacterialDNA-Directed RNA PolymerasesFatty AcidsFresh WaterLegionellaLegionella pneumophilaMembrane ProteinsMolecular Sequence DataPhylogenyRandom Amplified Polymorphic DNA TechniqueBacterial ProteinsCarrier ProteinsDNA, BacterialDNA-Directed RNA PolymerasesDotA protein, Legionella pneumophilaFatty AcidsMembrane ProteinsRNA polymerase beta subunit

Identifiers

PMID15691915
PMCPMC546754

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.