ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2005
Targeting the aluminum tolerance gene Alt3 region in rye, using rice/rye micro-colinearity.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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Who cites it
13 citing papers in PubMed.
- Recent advancements in molecular marker-assisted selection and applications in plant breeding programmes.Journal, genetic engineering & biotechnology · 2021Review
- Genetic mapping of a 7R Al tolerance QTL in triticale (x Triticosecale Wittmack).Journal of applied genetics · 2014Article
- Physical analysis of the complex rye (Secale cereale L.) Alt4 aluminium (aluminum) tolerance locus using a whole-genome BAC library of rye cv. Blanco.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2009Article
- An ALMT1 gene cluster controlling aluminum tolerance at the Alt4 locus of rye (Secale cereale L).Genetics · 2008Article
- Article
- High-resolution mapping of the Alp locus and identification of a candidate gene HvMATE controlling aluminium tolerance in barley (Hordeum vulgare L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2007Article
- Genetic diversity for aluminum tolerance in sorghum.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2007Article
- Candidate gene identification of an aluminum-activated organic acid transporter gene at the Alt4 locus for aluminum tolerance in rye (Secale cereale L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2007Article
- PeanutMap: an online genome database for comparative molecular maps of peanut.BMC bioinformatics · 2006Article
- Aluminum tolerance genes are conserved between monocots and dicots.Proceedings of the National Academy of Sciences of the United States of America · 2006Article
- Identification of molecular markers for aluminium tolerance in diploid oat through comparative mapping and QTL analysis.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2006Article
- A new aluminum tolerance gene located on rye chromosome arm 7RS.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2005Article
- Diversity Arrays Technology-based PCR markers for marker assisted selection of aluminum tolerance in triticale (Molecular breeding : new strategies in plant improvementArticle
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5 authors.
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No grant is acknowledged in the PubMed record.
Abstract
Characterization and manipulation of aluminum (Al) tolerance genes offers a solution to Al toxicity problems in crop cultivation on acid soil, which composes approximately 40% of all arable land. By exploiting the rice (Oryza sativa L.)/rye (Secale cereale L.) syntenic relationship, the potential for map-based cloning of genes controlling Al tolerance in rye (the most Al-tolerant cereal) was explored. An attempt to clone an Al tolerance gene (Alt3) from rye was initiated by using DNA markers flanking the rye Alt3 gene, from many cereals. Two rice-derived, PCR-based markers flanking the Alt3 gene, B1 and B4, were used to screen 1,123 plants of a rye F2 population segregating for Alt3. Fifteen recombinant plants were identified. Four additional RFLP markers developed from rice genes/putative genes, spanning 10 kb of a 160-kb rice BAC, were mapped to the Alt3 region. Two rice markers flanked the Alt3 locus at a distance of 0.05 cM, while two others co-segregated with it. The rice/rye micro-colinearity worked very well to delineate and map the Alt3 gene region in rye. A rye fragment suspected to be part of the Alt3 candidate gene was identified, but at this level, the rye/rice microsynteny relationship broke down. Because of sequence differences between rice and rye and the complexity of the rye sequence, we have been unable to clone a full-length candidate gene in rye. Further attempts to clone a full-length rye Alt3 candidate gene will necessitate the creation of a rye large-insert library.
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