Evidence map›Paper›PMID 15687257›Full record

ArticleGenes & development2005

Rad51-dependent DNA structures accumulate at damaged replication forks in sgs1 mutants defective in the yeast ortholog of BLM RecQ helicase.

Giordano Liberi, Giulio Maffioletti, Chiara Lucca, Irene Chiolo, Anastasia Baryshnikova, Cecilia Cotta-Ramusino, Massimo Lopes, Achille Pellicioli, James E Haber, Marco Foiani

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 186 papers.

0numbers the graph read from it
0cells of the map it votes in
186citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

186 citing papers in PubMed, 303 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. RAD51: Beyond the break.Seminars in cell & developmental biology · 2021
    Review
  13. Article
  14. The Srs2 helicase dampens DNA damage checkpoint by recycling RPA from chromatin.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  15. Article
  16. Article
  17. Article
  18. microPublication biology · 2021
    Article
  19. Article
  20. Review

126 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Giordano LiberiF.I.R.C. Institute of Molecular Oncology Foundation, 20141, Milan, Italy. giordano.liberi@ifom-ieo-campus.it
Giulio Maffioletti
Chiara Lucca
Irene Chiolo
Anastasia Baryshnikova
Cecilia Cotta-Ramusino
Massimo Lopes
Achille Pellicioli
James E Haber
Marco Foiani
FIRC Institute of Molecular Oncology · ITBrandeis University · USUniversity of Milan · IT

Funding

Arrest, Recovery, and Adaptation from DNA DamageR01GM061766 · NIGMS · BRANDEIS UNIVERSITY · PI HABER, JAMES E · 2001 to 2016
$4.6M
NIGMS NIH HHS GM61766NIGMS NIH HHS R01 GM061766Telethon GGP030412
6 · The paper itself

Abstract

S-phase cells overcome chromosome lesions through replication-coupled recombination processes that seem to be assisted by recombination-dependent DNA structures and/or replication-related sister chromatid junctions. RecQ helicases, including yeast Sgs1 and human BLM, have been implicated in both replication and recombination and protect genome integrity by preventing unscheduled mitotic recombination events. We have studied the RecQ helicase-mediated mechanisms controlling genome stability by analyzing replication forks encountering a damaged template in sgs1 cells. We show that, in sgs1 mutants, recombination-dependent cruciform structures accumulate at damaged forks. Their accumulation requires Rad51 protein, is counteracted by Srs2 DNA helicase, and does not prevent fork movement. Sgs1, but not Srs2, promotes resolution of these recombination intermediates. A functional Rad53 checkpoint kinase that is known to protect the integrity of the sister chromatid junctions is required for the accumulation of recombination intermediates in sgs1 mutants. Finally, top3 and top3 sgs1 mutants accumulate the same structures as sgs1 cells. We suggest that, in sgs1 cells, the unscheduled accumulation of Rad51-dependent cruciform structures at damaged forks result from defective maturation of recombination-dependent intermediates that originate from the replication-related sister chromatid junctions. Our findings might contribute to explaining some of the recombination defects of BLM cells.

Indexed as

Adenosine TriphosphatasesDNADNA-Binding ProteinsDNA HelicasesDNA ReplicationRad51 RecombinaseRecQ HelicasesSaccharomyces cerevisiae ProteinsYeastsAdenosine TriphosphatasesDNADNA-Binding ProteinsDNA HelicasesRad51 RecombinaseRecQ HelicasesRECQL protein, humanSaccharomyces cerevisiae ProteinsSGS1 protein, S cerevisiae

Identifiers

PMID15687257
PMCPMC546512
OpenAlexW2170450010

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.