Evidence map›Paper›PMID 15684076›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2005

Association of the NuMA region on chromosome 11q13 with breast cancer susceptibility.

Stefan Kammerer, Richard B Roth, Carolyn R Hoyal, Richard Reneland, George Marnellos, Marion Kiechle, Ulrike Schwarz-Boeger, Lyn R Griffiths, Florian Ebner, Joachim Rehbock and 3 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.4field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Stefan KammererSequenom, Inc., San Diego, CA 92121, USA.
Richard B Roth
Carolyn R Hoyal
Richard Reneland
George Marnellos
Marion Kiechle
Ulrike Schwarz-Boeger
Lyn R Griffiths
Florian Ebner
Joachim Rehbock
Charles R Cantor
Matthew R Nelson
Andreas Braun
Sequenom (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The development of breast cancer is a complex process that involves multiple genes at many stages, from initial cell cycle dysregulation to disease progression. To identify genetic variations that influence this process, we conducted a large-scale association study using a collection of German cases and controls and >25,000 SNPs located within 16,000 genes. One of the loci identified was located on chromosome 11q13 [odds ratio (OR)=1.85, P=0.017]. The initial association was subsequently tested in two independent breast cancer collections. In both sample sets, the frequency of the susceptibility allele was increased in the cases (OR=1.6, P=0.01). The susceptibility allele was also associated with an increase in cancer family history (P=0.1). Fine mapping showed that the region of association extends approximately 300 kb and spans several genes, including the gene encoding the nuclear mitotic apparatus protein (NuMA). A nonsynonymous SNP (A794G) in NuMA was identified that showed a stronger association with breast cancer risk than the initial marker SNP (OR=2.8, P=0.005 initial sample; OR=2.1, P=0.002 combined). NuMA is a cell cycle-related protein essential for normal mitosis that is degraded in early apoptosis. NuMA-retinoic acid receptor alpha fusion proteins have been described in acute promyelocytic leukemia. Although the potential functional relevance of the A794G variation requires further biological validation, we conclude that variations in the NuMA gene are likely responsible for the observed increased breast cancer risk.

Indexed as

Chromosomes, Human, Pair 11AdultAgedAged, 80 and overAntigens, NuclearBreast NeoplasmsCell Cycle ProteinsDisease SusceptibilityFemaleGenetic MarkersGenotypeHumansLinkage DisequilibriumMiddle AgedNuclear Matrix-Associated ProteinsNuclear ProteinsAntigens, NuclearCell Cycle ProteinsGenetic MarkersNuclear Matrix-Associated ProteinsNuclear ProteinsNUMA1 protein, human

Identifiers

PMID15684076
PMCPMC548529
OpenAlexW1518187476

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.