Evidence map›Paper›PMID 15678159›Full record

ArticleEMBO reports2005

CTCF is conserved from Drosophila to humans and confers enhancer blocking of the Fab-8 insulator.

Hanlim Moon, Galina Filippova, Dmitry Loukinov, Elena Pugacheva, Qi Chen, Sheryl T Smith, Adam Munhall, Britta Grewe, Marek Bartkuhn, Rüdiger Arnold and 6 more

Open access · greenAbstract read
In one paragraph

Article in EMBO reports, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 164 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
164citing papers in PubMed, 1 pooled it
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

164 citing papers in PubMed, 1 synthesis or guideline pooled it, 246 citations in OpenAlex.

  1. An updated catalog ofFrontiers in molecular neuroscience · 2023
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  13. ThebioRxiv : the preprint server for biology · 2025
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104 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 3 countries.

Hanlim MoonSection of Molecular Pathology, Laboratory of Immunopathology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Rockville, Maryland 20852, USA.
Galina Filippova
Dmitry Loukinov
Elena Pugacheva
Qi Chen
Sheryl T Smith
Adam Munhall
Britta Grewe
Marek Bartkuhn
Rüdiger Arnold
Les J Burke
Renate Renkawitz-Pohl
Rolf Ohlsson
Jumin Zhou
Rainer Renkawitz
Victor Lobanenkov
University of Giessen · DENational Institute of Allergy and Infectious Diseases · USThe Wistar Institute · USFred Hutch Cancer Center · USPhilipps University of Marburg · DENational Institutes of Health · USUppsala University · SE

Funding

Normal and Pathologic Functions of CTCF and Its Distinct Classes of DNA-targetsZIAAI000860 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI LOBANENKOV, VICTOR · 2009 to 2025
$15.4M
Transcriptional Regulation Of Ctcf And Boris ExpressionZ01AI000860 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI LOBANENKOV, VICTOR · 2000 to 2008
$1.5M
6 · The paper itself

Abstract

Eukaryotic transcriptional regulation often involves regulatory elements separated from the cognate genes by long distances, whereas appropriately positioned insulator or enhancer-blocking elements shield promoters from illegitimate enhancer action. Four proteins have been identified in Drosophila mediating enhancer blocking-Su(Hw), Zw5, BEAF32 and GAGA factor. In vertebrates, the single protein CTCF, with 11 highly conserved zinc fingers, confers enhancer blocking in all known chromatin insulators. Here, we characterize an orthologous CTCF factor in Drosophila with a similar domain structure, binding site specificity and transcriptional repression activity as in vertebrates. In addition, we demonstrate that one of the insulators (Fab-8) in the Drosophila Abdominal-B locus mediates enhancer blocking by dCTCF. Therefore, the enhancer-blocking protein CTCF and, most probably, the mechanism of enhancer blocking mediated by this remarkably versatile factor are conserved from Drosophila to humans.

Indexed as

Enhancer Elements, GeneticInsulator ElementsAmino Acid SequenceAnimalsCCCTC-Binding FactorDNA-Binding ProteinsDrosophilaDrosophila ProteinsGene Expression RegulationHomeodomain ProteinsHumansMolecular Sequence DataRepressor ProteinsAbd-B proteins, DrosophilaCCCTC-Binding FactorCTCF protein, humanDNA-Binding ProteinsDrosophila ProteinsHomeodomain ProteinsRepressor Proteins

Identifiers

PMID15678159
PMCPMC1299244
OpenAlexW1973726475

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.