ArticleNucleic acids research2005
The genome sequence of Xanthomonas oryzae pathovar oryzae KACC10331, the bacterial blight pathogen of rice.
Article in Nucleic acids research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 168 papers.
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Who cites it
168 citing papers in PubMed, 441 citations in OpenAlex.
- Genomic insights into the TAL effector diversity and SWEET gene targeting in Indian strains of Xanthomonas oryzae pv. oryzae.Archives of microbiology · 2026Article
- Metal-driven nanoassembly of hexahistidine-tagged melittin enables superior phytopathogen biofilm degradation with attenuated toxicity.Journal of nanobiotechnology · 2026Article
- Beyond Resistance Genes: Silencing Susceptibility.International journal of molecular sciences · 2026Review
- Effector Triggered Susceptibility and Immunity in Bacterial Diseases of Leaf Blight and Streak in Rice.Rice (New York, N.Y.) · 2026Review
- Leucine Aminopeptidase fromBiomolecules · 2026Article
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- Identifying the role of cellulase geneMolecular breeding : new strategies in plant improvement · 2025Article
- Rhizosphere legacy of leaf-diseased rice and its impact on next generation.Frontiers in microbiology · 2025Article
- MGV-seq: a sensitive and culture-independent method for detecting microbial genetic variation.Frontiers in microbiology · 2025Article
- Review
- OsMKK1 is a novel element that positively regulates the Xa21-mediated resistance response to Xanthomonas oryzae pv. oryzae in rice.Plant cell reports · 2024Article
- Comprehensive phenomic and genomic studies of the species,Frontiers in plant science · 2024Article
- Article
- Assembling highly repetitive Xanthomonas TALomes using Oxford Nanopore sequencing.BMC genomics · 2023Article
- Chromosomal Location ofPlants (Basel, Switzerland) · 2023Article
- Domestication, breeding, omics research, and important genes ofFrontiers in plant science · 2023Review
- Antimicrobial activity of the biologically synthesized zinc oxide nanoparticles against important rice pathogens.Physiology and molecular biology of plants : an international journal of functional plant biology · 2022Article
- Antibacterial, anti-biofilm, and anti-virulence potential of tea tree oil against leaf blight pathogen Xanthomonas oryzae pv. oryzae instigates disease suppression.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022Article
- The lolB gene in Xanthomonas campestris pv. campestris is required for bacterial attachment, stress tolerance, and virulence.BMC microbiology · 2022Article
- Genome sequencing of the bacterial blight pathogen DY89031 reveals its diverse virulence and origins of Xanthomonas oryzae pv. oryzae strains.Science China. Life sciences · 2021Article
108 more citing papers are in PubMed but not listed here.
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Authors and funding
19 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The nucleotide sequence was determined for the genome of Xanthomonas oryzae pathovar oryzae (Xoo) KACC10331, a bacterium that causes bacterial blight in rice (Oryza sativa L.). The genome is comprised of a single, 4 941 439 bp, circular chromosome that is G + C rich (63.7%). The genome includes 4637 open reading frames (ORFs) of which 3340 (72.0%) could be assigned putative function. Orthologs for 80% of the predicted Xoo genes were found in the previously reported X.axonopodis pv. citri (Xac) and X.campestris pv. campestris (Xcc) genomes, but 245 genes apparently specific to Xoo were identified. Xoo genes likely to be associated with pathogenesis include eight with similarity to Xanthomonas avirulence (avr) genes, a set of hypersensitive reaction and pathogenicity (hrp) genes, genes for exopolysaccharide production, and genes encoding extracellular plant cell wall-degrading enzymes. The presence of these genes provides insights into the interactions of this pathogen with its gramineous host.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.