Evidence map›Paper›PMID 15665132›Full record

ArticleBiophysical journal2005

Protein self-association induced by macromolecular crowding: a quantitative analysis by magnetic relaxation dispersion.

Karim Snoussi, Bertil Halle

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 83 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Liquid-Liquid Phase Separation in Crowded Environments.International journal of molecular sciences · 2020
    Review
  6. Review
  7. Article
  8. What macromolecular crowding can do to a protein.International journal of molecular sciences · 2014
    Review
  9. Review
  10. Review
  11. Review
  12. Article
  13. Article
  14. Generalized fundamental measure theory for atomistic modeling of macromolecular crowding.Physical review. E, Statistical, nonlinear, and soft matter physics · 2010
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Karim SnoussiDepartment of Biophysical Chemistry, Lund University, SE-22100 Lund, Sweden. karim.snoussi@port.ac.uk
Bertil Halle
Lund University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the presence of high concentrations of inert macromolecules, the self-association of proteins is strongly enhanced through an entropic, excluded-volume effect variously called macromolecular crowding or depletion attraction. Despite the predicted large magnitude of this universal effect and its far-reaching biological implications, few experimental studies of macromolecular crowding have been reported. Here, we introduce a powerful new technique, fast field-cycling magnetic relaxation dispersion, for investigating crowding effects on protein self-association equilibria. By recording the solvent proton spin relaxation rate over a wide range of magnetic field strengths, we determine the populations of coexisting monomers and decamers of bovine pancreatic trypsin inhibitor in the presence of dextran up to a macromolecular volume fraction of 27%. Already at a dextran volume fraction of 14%, we find a 30-fold increase of the decamer population and 510(5)-fold increase of the association constant. The analysis of these results, in terms of a statistical-mechanical model that incorporates polymer flexibility as well as the excluded volume of the protein, shows that the dramatic enhancement of bovine pancreatic trypsin inhibitor self-association can be quantitatively rationalized in terms of hard repulsive interactions.

Indexed as

AnimalsAprotininBiophysicsCattleDextransEntropyHydrogenHydrogen-Ion ConcentrationKineticsMacromolecular SubstancesMagnetic Resonance SpectroscopyMagneticsModels, MolecularModels, StatisticalPolymersProtein BindingAprotininDextransHydrogenMacromolecular SubstancesPolymersProteinsProtonsSolvents

Identifiers

PMID15665132
PMCPMC1305380
OpenAlexW2106793014

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.