Evidence map›Paper›PMID 15661905›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2005

Immune selection of hot-spot beta 2-microglobulin gene mutations, HLA-A2 allospecificity loss, and antigen-processing machinery component down-regulation in melanoma cells derived from recurrent metastases following immunotherapy.

Chien-Chung Chang, Michael Campoli, Nicholas P Restifo, Xinhui Wang, Soldano Ferrone

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 1 synthesis or guideline pooled it, 95 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Review
  6. Review
  7. Review
  8. Review
  9. Review
  10. Article
  11. Review
  12. Alternative mRNA splicing in cancer immunotherapy.Nature reviews. Immunology · 2019
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Acquired resistance to immunotherapy in MMR-D pancreatic cancer.Journal for immunotherapy of cancer · 2018
    Article
  18. Defective HLA class I antigen processing machinery in cancer.Cancer immunology, immunotherapy : CII · 2018
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Chien-Chung ChangDepartment of Immunology, Roswell Park Cancer Institute, Buffalo, NY 14263, USA.
Michael Campoli
Nicholas P Restifo
Xinhui Wang
Soldano Ferrone
Roswell Park Comprehensive Cancer Center · USNational Institutes of Health · US

Funding

Two-Spirit Films in Indigenous Cancer HealthP30CA016056 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI Christine B. Ambrosone · 1985 to 2026
$116.6M
Building on the success of the adoptive immunotherapy of cancerZ01BC010763 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI RESTIFO, NICHOLAS P · 2006 to 2008
$6.4M
MULTIDISCIPLINARY APPROACHES TUMOR IMMUNOLOGYT32CA085183 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI Scott I. Abrams · 2001 to 2026
$3.1M
HLA CLASS I PEPTIDE COMPLEX ADNORMALITIES IN MELANOMAR01CA067108 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI FERRONE, SOLDANO · 1996 to 2004
$1.5M
RECOMBINANT AND SYNTHETIC ANTI-CANCER VACCINESZ01SC006670 · SC · CLINICAL SCIENCES · PI RESTIFO, NICHOLAS P · 1996 to 2005
–
Intramural NIH HHS Z01 BC010763Intramural NIH HHS Z99 CA999999NCI NIH HHS P30 CA016056NCI NIH HHS P30 CA16056NCI NIH HHS R01 CA067108NCI NIH HHS R01 CA67108NCI NIH HHS T32 CA085183NCI NIH HHS T32 CA85183
6 · The paper itself

Abstract

Scanty information is available about the mechanisms underlying HLA class I Ag abnormalities in malignant cells exposed to strong T cell-mediated selective pressure. In this study, we have characterized the molecular defects underlying HLA class I Ag loss in five melanoma cell lines derived from recurrent metastases following initial clinical responses to T cell-based immunotherapy. Point mutations in the translation initiation codon (ATG-->ATA) and in codon 31 (TCA-->TGA) of the beta(2)-microglobulin (beta(2)m) gene were identified in the melanoma cell lines 1074MEL and 1174MEL, respectively. A hot-spot CT dinucleotide deletion within codon 13-15 was found in the melanoma cell lines 1106MEL, 1180MEL, and 1259MEL. Reconstitution of beta(2)m expression restored HLA class I Ag expression in the five melanoma cell lines; however, the HLA-A and HLA-B,-C gene products were differentially expressed by 1074MEL, 1106MEL, and 1259MEL cells. In addition, in 1259MEL cells, the Ag-processing machinery components calnexin, calreticulin, and low m.w. polypeptide 10 are down-regulated, and HLA-A2 Ags are selectively lost because of a single cytosine deletion in the HLA-A2 gene exon 4. Our results in conjunction with those in the literature suggest the emergence of a preferential beta(2)m gene mutation in melanoma cells following strong T cell-mediated immune selection. Furthermore, the presence of multiple HLA class I Ag defects within a tumor cell population may reflect the accumulation of multiple escape mechanisms developed by melanoma cells to avoid distinct sequential T cell-mediated selective events.

Indexed as

ImmunotherapyPoint MutationAmino Acid SequenceAntigen PresentationBase Sequencebeta 2-MicroglobulinCell Line, TransformedCell Line, TumorDNA, ComplementaryDown-RegulationEpitopesGene Expression Regulation, NeoplasticHLA-A2 AntigenHLA-A AntigensHLA-B AntigensHLA-C Antigensbeta 2-MicroglobulinDNA, ComplementaryEpitopesHLA-A*02:01 antigenHLA-A2 AntigenHLA-A AntigensHLA-B AntigensHLA-C AntigensMART-1-Melan-A(27-35) epitopeNeoplasm ProteinsProtein Subunits

Identifiers

PMID15661905
PMCPMC2245899
OpenAlexW1952554789

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.