Evidence map›Paper›PMID 15659697›Full record

ArticleJournal of bacteriology2005

Expression profiling of virulence and pathogenicity genes of Xanthomonas axonopodis pv. citri.

Gustavo Astua-Monge, Juliana Freitas-Astua, Gisele Bacocina, Juliana Roncoletta, Sérgio A Carvalho, Marcos A Machado

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 73 citations in OpenAlex.

  1. Xylose Isomerase Depletion Enhances Virulence ofInternational journal of molecular sciences · 2023
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  2. International journal of molecular sciences · 2023
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  6. Secrete or perish: The role of secretion systems inComputational and structural biotechnology journal · 2021
    Review
  7. Genetic and structural determinants on iron assimilation pathways in the plant pathogen Xanthomonas citri subsp. citri and Xanthomonas sp.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Gustavo Astua-MongeLaboratório de Biotecnologia, Centro APTA Citros Sylvio Moreira, Cordeirópolis, São Paulo 13490-970, Brazil. gamo@centrodecitricultura.br
Juliana Freitas-Astua
Gisele Bacocina
Juliana Roncoletta
Sérgio A Carvalho
Marcos A Machado
Brazilian Agricultural Research Corporation · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA macroarrays of 279 genes of Xanthomonas axonopodis pv. citri potentially associated with pathogenicity and virulence were used to compare the transcriptional alterations of this bacterium in response to two synthetic media. Data analysis indicated that 31 genes were up-regulated by synthetic medium XVM2, while only 7 genes were repressed. The results suggest that XVM2 could be used as an in vitro system to identify candidate genes involved in pathogenesis of X. axonopodis pv. citri.

Indexed as

Gene Expression ProfilingBase SequenceConserved SequenceGene Expression Regulation, BacterialGenes, BacterialOligonucleotide Array Sequence AnalysisVirulenceXanthomonas

Identifiers

PMID15659697
PMCPMC545697
OpenAlexW2015257671

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.