Evidence map›Paper›PMID 15657445›Full record

ArticleMolecular and cellular biology2005

A direct intersection between p53 and transforming growth factor beta pathways targets chromatin modification and transcription repression of the alpha-fetoprotein gene.

Deepti S Wilkinson, Stacey K Ogden, Sabrina A Stratton, Julie L Piechan, Thi T Nguyen, George A Smulian, Michelle Craig Barton

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 76 citations in OpenAlex.

  1. Article
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  4. Article
  5. Review
  6. The SMAD2/3 pathway is involved in hepaCAM-induced apoptosis by inhibiting the nuclear translocation of SMAD2/3 in bladder cancer cells.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Article
  7. Article
  8. Article
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  11. Spatial aspects in the SMAD signaling pathway.Journal of mathematical biology · 2013
    Article
  12. Bile acid metabolism and signaling.Comprehensive Physiology · 2013 · on this map
    Review
  13. Article
  14. Article
  15. Mechanisms of p53 activation and physiological relevance in the developing kidney.American journal of physiology. Renal physiology · 2012
    Article
  16. Crosstalk between p53 and TGF-β Signalling.Journal of signal transduction · 2012
    Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Deepti S WilkinsonDepartment of Biochemistry and Molecular Biology, University of Texas M.D. Anderson Cancer Center, Houston, TX 77030, USA.
Stacey K Ogden
Sabrina A Stratton
Julie L Piechan
Thi T Nguyen
George A Smulian
Michelle Craig Barton
The University of Texas MD Anderson Cancer Center · USLaboratory of Molecular Genetics · PLUniversity of Cincinnati Medical Center · US

Funding

REGULATION OF CELLULAR GROWTH AND DIFFERENTIATIONT32CA059268 · NCI · UNIVERSITY OF CINCINNATI · PI KHAN, SOHAIB A. · 1993 to 2010
$2.3M
MOLECULAR BASIS OF DIFFERENTIATION AND DEVELOPMENTT32HD007325 · NICHD · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KLEIN, WILLIAM H. · 1986 to 2011
$2.1M
In Vitro Reconstitution of Alpha Fetroprotein RegulationR01GM053683 · NIGMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BARTON, MICHELLE ANN · 1997 to 2007
$1.6M
RECONSTITUTION OF GENE REGULATION IN LIVER REGENERATIONR01GM060213 · NIGMS · UNIVERSITY OF TEXAS MD ANDERSON CAN CTR · PI BARTON, MICHELLE ANN · 2000 to 2003
$1.0M
NCI NIH HHS T32 CA059268NCI NIH HHS T32 CA 59268NICHD NIH HHS T32 HD007325NICHD NIH HHS T32 HD 07325NIGMS NIH HHS GM 53683NIGMS NIH HHS GM 60213NIGMS NIH HHS R01 GM053683NIGMS NIH HHS R01 GM060213
6 · The paper itself

Abstract

We purified the oncoprotein SnoN and found that it functions as a corepressor of the tumor suppressor p53 in the regulation of the hepatic alpha-fetoprotein (AFP) tumor marker gene. p53 promotes SnoN and histone deacetylase interaction at an overlapping Smad binding, p53 regulatory element (SBE/p53RE) in AFP. Comparison of wild-type and p53-null mouse liver tissue by using chromatin immunoprecipitation (ChIP) reveals that the absence of p53 protein correlates with the disappearance of SnoN at the SBE/p53RE and loss of AFP developmental repression. Treatment of AFP-expressing hepatoma cells with transforming growth factor-beta1 (TGF-beta1) induced SnoN transcription and Smad2 activation, concomitant with AFP repression. ChIP assays show that TGF-beta1 stimulates p53, Smad4, P-Smad2 binding, and histone H3K9 deacetylation and methylation, at the SBE/p53RE. Depletion, by small interfering RNA, of SnoN and/or p53 in hepatoma cells disrupted repression of AFP transcription. These findings support a model of cooperativity between p53 and TGF-beta effectors in chromatin modification and transcription repression of an oncodevelopmental tumor marker gene.

Indexed as

Acetylationalpha-FetoproteinsAnimalsChromatinChromatin ImmunoprecipitationDNA-Binding ProteinsHeLa CellsHistonesHumansIntracellular Signaling Peptides and ProteinsLiverMethylationMiceMice, KnockoutProto-Oncogene ProteinsSmad2 Proteinalpha-FetoproteinsChromatinDNA-Binding ProteinsHistonesIntracellular Signaling Peptides and ProteinsProto-Oncogene ProteinsSKIL protein, humanSmad2 ProteinSMAD2 protein, humanSmad2 protein, mouseTGFB1 protein, humanTgfb1 protein, mouseTrans-ActivatorsTransforming Growth Factor betaTransforming Growth Factor beta1Tumor Suppressor Protein p53

Identifiers

PMID15657445
PMCPMC544019
OpenAlexW2125604855

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.