ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2005
Development and mapping of microsatellite (SSR) markers in wheat.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 210 papers, 2 of them syntheses that pooled it.
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Who cites it
210 citing papers in PubMed, 2 syntheses or guidelines pooled it, 633 citations in OpenAlex.
- Consensus genomic regions associated with multiple abiotic stress tolerance in wheat and implications for wheat breeding.Scientific reports · 2022Pooled it
- Genome-wide meta-analysis of QTL for morphological related traits of flag leaf in bread wheat.PloS one · 2022Pooled it
- Assembly and comparative analysis of the complete mitochondrial genomes ofFrontiers in plant science · 2026Article
- Assembly and comparative analysis of the complete mitochondrial genome of red raspberry (Rubus idaeus L.) revealing repeat-mediated recombination and gene transfer.BMC plant biology · 2025Article
- Genetic mapping of QTLs for resistance to bacterial leaf streak in hexaploid wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Cytogenetic identification and molecular mapping for the wheat-Thinopyrum ponticum introgression line with resistance to Fusarium head blight.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Genetic linkage map construction and QTL analysis for plant height in proso millet (Panicum miliaceum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Exploring the genetic architecture of powdery mildew resistance in wheat through QTL meta-analysis.Frontiers in plant science · 2024Article
- Molecular genetic divergence analysis amongst high curcumin lines of Golden Crop (Curcuma longa L.) using SSR marker and use in trait-specific breeding.Scientific reports · 2023Article
- Comprehensive meta-QTL analysis for dissecting the genetic architecture of stripe rust resistance in bread wheat.BMC genomics · 2023Article
- Characterization and identification of the powdery mildew resistance gene in wheat breeding line ShiCG15-009.BMC plant biology · 2023Article
- Article
- Development and utility of SSR markers based onFrontiers in plant science · 2023Article
- De novo assembly of Iron-Heart Cunninghamia lanceolata transcriptome and EST-SSR marker development for genetic diversity analysis.PloS one · 2023Article
- Identification and Validation of a Chromosome 4D Quantitative Trait Locus Hotspot Conferring Heat Tolerance in Common Wheat (Plants (Basel, Switzerland) · 2022Article
- Evaluation of Genetic Diversity Based on Microsatellites and Phytochemical Markers of Core Collection ofPlants (Basel, Switzerland) · 2022Article
- Genetic diversity, population structure and relationship of Ethiopian barley (Journal of genetics · 2022Article
- The decreased expression of GW2 homologous genes contributed to the increased grain width and thousand‑grain weight in wheat-Dasypyrum villosum 6VS·6DL translocation lines.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- Characterization and Use in Wheat Breeding of Leaf Rust Resistance Genes from Durable Varieties.Biology · 2021Article
- Weed competitive ability in wheat: a peek through in its functional significance, present status and future prospects.Physiology and molecular biology of plants : an international journal of functional plant biology · 2021Review
150 more citing papers are in PubMed but not listed here.
Corrections and comments
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Authors and funding
9 authors at 5 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Microsatellite DNA markers are consistently found to be more informative than other classes of markers in hexaploid wheat. The objectives of this research were to develop new primers flanking wheat microsatellites and to position the associated loci on the wheat genome map by genetic linkage mapping in the ITMI W7984 x Opata85 recombinant inbred line (RIL) population and/or by physical mapping with cytogenetic stocks. We observed that the efficiency of marker development could be increased in wheat by creating libraries from sheared rather than enzyme-digested DNA fragments for microsatellite screening, by focusing on microsatellites with the [ATT/TAA]n motif, and by adding an untemplated G-C clamp to the 5'-end of primers. A total of 540 microsatellite-flanking primer pairs were developed, tested, and annotated from random genomic libraries. Primer pairs and associated loci were assigned identifiers prefixed with BARC (the acronym for the USDA-ARS Beltsville Agricultural Research Center) or Xbarc, respectively. A subset of 315 primer sets was used to map 347 loci. One hundred and twenty-five loci were localized by physical mapping alone. Of the 222 loci mapped with the ITMI population, 126 were also physically mapped. Considering all mapped loci, 126, 125, and 96 mapped to the A, B, and D genomes, respectively. Twenty-three of the new loci were positioned in gaps larger than 10 cM in the map based on pre-existing markers, and 14 mapped to the ends of chromosomes. The length of the linkage map was extended by 80.7 cM. Map positions were consistent for 111 of the 126 loci positioned by both genetic and physical mapping. The majority of the 15 discrepancies between genetic and physical mapping involved chromosome group 5.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.