Evidence map›Paper›PMID 15653720›Full record

ArticleBiophysical journal2005

Experimental generation and computational modeling of intracellular pH gradients in cardiac myocytes.

Pawel Swietach, Chae-Hun Leem, Kenneth W Spitzer, Richard D Vaughan-Jones

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 47 citations in OpenAlex.

  1. CaBiomolecules · 2025
    Review
  2. Article
  3. Review
  4. Article
  5. Nuclear proton dynamics and interactions with calcium signaling.Journal of molecular and cellular cardiology · 2016
    Article
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  8. Article
  9. Review
  10. Evidence that protons act as neurotransmitters at vestibular hair cell-calyx afferent synapses.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Coupled Ca2+/H+ transport by cytoplasmic buffers regulates local Ca2+ and H+ ion signaling.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Pawel SwietachBurdon Sanderson Cardiac Science Centre, University Laboratory of Physiology, Oxford OX1 3PT, UK.
Chae-Hun Leem
Kenneth W Spitzer
Richard D Vaughan-Jones
The Gurdon Institute · GBUlsan College · KRUniversity of Utah · US

Funding

pH REGULATION IN HEART CELLSR37HL042873 · NHLBI · UNIVERSITY OF UTAH · PI SPITZER, KENNETH W · 2003 to 2012
$2.0M
NHLBI NIH HHS 5R37HL042873NHLBI NIH HHS R37 HL042873
6 · The paper itself

Abstract

It is often assumed that pH(i) is spatially uniform within cells. A double-barreled microperfusion system was used to apply solutions of weak acid (acetic acid, CO(2)) or base (ammonia) to localized regions of an isolated ventricular myocyte (guinea pig). A stable, longitudinal pH(i) gradient (up to 1 pH(i) unit) was observed (using confocal imaging of SNARF-1 fluorescence). Changing the fractional exposure of the cell to weak acid/base altered the gradient, as did changing the concentration and type of weak acid/base applied. A diffusion-reaction computational model accurately simulated this behavior of pH(i). The model assumes that H(i)(+) movement occurs via diffusive shuttling on mobile buffers, with little free H(+) diffusion. The average diffusion constant for mobile buffer was estimated as 33 x 10(-7) cm(2)/s, consistent with an apparent H(i)(+) diffusion coefficient, D(H)(app), of 14.4 x 10(-7) cm(2)/s (at pH(i) 7.07), a value two orders of magnitude lower than for H(+) ions in water but similar to that estimated recently from local acid injection via a cell-attached glass micropipette. We conclude that, because H(i)(+) mobility is so low, an extracellular concentration gradient of permeant weak acid readily induces pH(i) nonuniformity. Similar concentration gradients for weak acid (e.g., CO(2)) occur across border zones during regional myocardial ischemia, raising the possibility of steep pH(i) gradients within the heart under some pathophysiological conditions.

Indexed as

AcetatesAmmoniaAnimalsBiophysicsBuffersCarbonCarbon DioxideCell SizeCytoplasmDiffusionGuinea PigsHeart VentriclesHEPESHydrogen-Ion ConcentrationMicroscopy, ConfocalMicroscopy, FluorescenceAcetatesAmmoniaBuffersCarbonCarbon DioxideHEPESProtonsQuaternary Ammonium Compounds

Identifiers

PMID15653720
PMCPMC1305395
OpenAlexW2060922881

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.