Evidence map›Paper›PMID 15650874›Full record

ArticleImmunogenetics2005

Variable domains and a VpreB-like molecule are present in a jawless vertebrate.

John P Cannon, Robert N Haire, Zeev Pancer, M Gail Mueller, Diana Skapura, Max D Cooper, Gary W Litman

Abstract readComparative Study
In one paragraph

Article in Immunogenetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  3. Review
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  7. Article
  8. Review
  9. Article
  10. Blurring borders: innate immunity with adaptive features.Clinical & developmental immunology · 2007
    Review
  11. Article
  12. Article
  13. Article
  14. Reconstructing immune phylogeny: new perspectives.Nature reviews. Immunology · 2005
    Review
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

John P CannonDepartment of Molecular Genetics, All Children's Hospital, 801 Sixth Street South, St. Petersburg, FL 33701, USA.
Robert N Haire
Zeev Pancer
M Gail Mueller
Diana Skapura
Max D Cooper
Gary W Litman
University of South Florida St. Petersburg · USFlorida College · USHoward Hughes Medical Institute · USJohns Hopkins University · USUniversity of Alabama at Birmingham · US

Funding

EVOLUTIONARY ORIGINS OF IMMUNE-TYPE GENESR01AI023338 · NIAID · UNIVERSITY OF SOUTH FLORIDA · PI LITMAN, GARY WILLIAM · 1985 to 2014
$3.6M
NIAID NIH HHS R01 AI023338
6 · The paper itself

Abstract

Immunoglobulins (Igs) and T cell antigen receptors (TCRs) that undergo somatic diversification have not been identified in the two extant orders of jawless vertebrates, which occupy essential positions in terms of understanding the evolution of the emergence of adaptive immunity. Using a single motif-dependent PCR-based approach coupled with a vector that allows selection of cDNAs encoding secretion signal sequences, four different genes encoding Ig V-type domains were identified in the sea lamprey (Petromyzon marinus). One of the predicted proteins encoded by these genes shares structural characteristics with mammalian VpreB molecules, including the absence of a recognizable transmembrane region, a relatively high proportion of charged amino acids in its C-terminal tail and distinctive features of its secretion signal peptide. This is the first indication of a molecule related to the B cell receptor (BCR) complex in a species that diverged prior to the jawed vertebrates in which RAG-mediated adaptive immunity is first encountered.

Indexed as

Amino Acid SequenceAnimalsB-LymphocytesDNA, ComplementaryEvolution, MolecularImmunoglobulin Light ChainsImmunoglobulin Light Chains, SurrogateImmunoglobulin Variable RegionMembrane GlycoproteinsMolecular Sequence DataPetromyzonPre-B Cell ReceptorsReceptors, Antigen, B-CellSequence Homology, Amino AcidSpecies SpecificityDNA, ComplementaryImmunoglobulin Light ChainsImmunoglobulin Light Chains, SurrogateImmunoglobulin Variable RegionMembrane GlycoproteinsPre-B Cell ReceptorsReceptors, Antigen, B-Cell

Identifiers

PMID15650874
PMCPMC3689217
OpenAlexW2168976411

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.