Evidence map›Paper›PMID 15632172›Full record

ArticleThe Journal of biological chemistry2005

Alternative mRNA splicing of SMRT creates functional diversity by generating corepressor isoforms with different affinities for different nuclear receptors.

Michael L Goodson, Brian A Jonas, Martin L Privalsky

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. BQ323636.1, a Novel Splice Variant toClinical cancer research : an official journal of the American Association for Cancer Research · 2018
    Article
  9. The actions of thyroid hormone signaling in the nucleus.Molecular and cellular endocrinology · 2017
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Epigenetic distortion to VDR transcriptional regulation in prostate cancer cells.The Journal of steroid biochemistry and molecular biology · 2013
    Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Michael L GoodsonSection of Microbiology, University of California, Davis, California 95616, USA.
Brian A Jonas
Martin L Privalsky
University of California, Davis · US

Funding

Role of cofactors in nuclear hormone receptor function.R01DK053528 · NIDDK · UNIVERSITY OF CALIFORNIA DAVIS · PI PRIVALSKY, MARTIN L. · 1998 to 2012
$2.9M
Alternative SMRT Isoform FunctionF32DK062654 · NIDDK · UNIVERSITY OF CALIFORNIA DAVIS · PI GOODSON, MICHAEL L · 2002 to 2005
$148k
LYMPHOCYTE CYTOSOLIC CALCIUM IN HYPERTENSIONR03DK053538 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI ROMERO, JOSE R · 1997 to 1998
–
NIDDK NIH HHS 5F32DK062654-02NIDDK NIH HHS DK53538NIDDK NIH HHS R01 DK053528
6 · The paper itself

Abstract

Many eukaryotic transcription factors are bimodal in their regulatory properties and can both repress and activate expression of their target genes. These divergent transcriptional properties are conferred through recruitment of auxiliary proteins, denoted coactivators and corepressors. Repression plays a particularly critical role in the functions of the nuclear receptors, a large family of ligand-regulated transcription factors involved in metazoan development, differentiation, reproduction, and homeostasis. The SMRT corepressor interacts directly with nuclear receptors and serves, in turn, as a platform for the assembly of a larger corepressor complex. We report here that SMRT is expressed in cells by alternative mRNA splicing to yield two distinct variants or isoforms. We designate these isoforms SMRTalpha and SMRTtau and demonstrate that these isoforms have significantly different affinities for different nuclear receptors. These isoforms are evolutionarily conserved and are expressed in a tissue-specific manner. Our results suggest that differential mRNA splicing serves to customize corepressor function in different cells, allowing the transcriptional properties of nuclear receptors to be adapted to different contexts.

Indexed as

Alternative SplicingTranscription, GeneticAnimalsBlotting, WesternCell LineCell Line, TumorDatabases as TopicDimerizationDNADNA-Binding ProteinsDNA, ComplementaryDose-Response Relationship, DrugExpressed Sequence TagsGenes, DominantHumansMiceDNADNA-Binding ProteinsDNA, ComplementaryMuramidaseNCOR2 protein, humanNcor2 protein, mouseNuclear Receptor Co-Repressor 2Protein IsoformsRepressor ProteinsRNA, Messenger

Identifiers

PMID15632172
PMCPMC2720035
OpenAlexW2040786715

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.