Evidence map›Paper›PMID 15623556›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2005

Normal gating of CFTR requires ATP binding to both nucleotide-binding domains and hydrolysis at the second nucleotide-binding domain.

Allan L Berger, Mutsuhiro Ikuma, Michael J Welsh

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 87 citations in OpenAlex.

  1. Etiology of Colitis-Complex Diarrhea in Growing Pigs: A Review.Animals : an open access journal from MDPI · 2021
    Review
  2. Article
  3. G551D mutation impairs PKA-dependent activation of CFTR channel that can be restored by novel GOF mutations.American journal of physiology. Lung cellular and molecular physiology · 2020
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. The gating of the CFTR channel.Cellular and molecular life sciences : CMLS · 2017
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Allan L BergerDepartment of Internal Medicine, Howard Hughes Medical Institute, Roy J. and Lucille A. Carver College of Medicine, University of Iowa, Iowa City, IA 52242, USA.
Mutsuhiro Ikuma
Michael J Welsh
Howard Hughes Medical Institute · USUniversity of Iowa · US

Funding

Vector Core-Core 2P30DK054759 · NIDDK · UNIVERSITY OF IOWA · PI Alejandro Antonio Pezzulo · 1998 to 2026
$30.5M
Xylitol Enhancement of Bacterial Killing by AirwayP50HL061234 · NHLBI · UNIVERSITY OF IOWA · PI ZABNER, JOSEPH · 1998 to 2007
$13.6M
SITE SPECIFIC ANTIINSULIN RECEPTOR ANTIBODIESP30DK025295 · NIDDK · UNIVERSITY OF IOWA · PI BAR, ROBERT S · 1986 to 2002
$2.6M
PATHOPHYSIOLOGY OF RESPIRATORY TRACT FLUID PRODUCTIONR37HL029851 · NHLBI · UNIVERSITY OF IOWA · PI WELSH, MICHAEL J. · 1996 to 2004
$1.4M
Mechanisms of Nucleotide Binding and Regulation of CFTRK08DK062938 · NIDDK · UNIVERSITY OF IOWA · PI BERGER, ALLAN L · 2003 to 2005
$306k
PATHOPHYSIOLOGY OF RESPIRATORY TRACT FLUID PRODUCTIONR01HL029851 · NHLBI · UNIVERSITY OF IOWA · PI WELSH, MICHAEL JOHN · 1985 to 1996
–
NHLBI NIH HHS HL29851NHLBI NIH HHS HL61234NHLBI NIH HHS P50 HL061234NHLBI NIH HHS R37 HL029851NIDDK NIH HHS DK062938NIDDK NIH HHS DK25295NIDDK NIH HHS DK54759NIDDK NIH HHS K08 DK062938NIDDK NIH HHS P30 DK054759
6 · The paper itself

Abstract

ATP interacts with the two nucleotide-binding domains (NBDs) of CFTR to control gating. However, it is unclear whether gating involves ATP binding alone, or also involves hydrolysis at each NBD. We introduced phenylalanine residues into nonconserved positions of each NBD Walker A motif to sterically prevent ATP binding. These mutations blocked [alpha-(32)P]8-N(3)-ATP labeling of the mutated NBD and reduced channel opening rate without changing burst duration. Introducing cysteine residues at these positions and modifying with N-ethylmaleimide produced the same gating behavior. These results indicate that normal gating requires ATP binding to both NBDs, but ATP interaction with one NBD is sufficient to support some activity. We also studied mutations of the conserved Walker A lysine residues (K464A and K1250A) that prevent hydrolysis. By combining substitutions that block ATP binding with Walker A lysine mutations, we could differentiate the role of ATP binding vs. hydrolysis at each NBD. The K1250A mutation prolonged burst duration; however, blocking ATP binding prevented the long bursts. These data indicate that ATP binding to NBD2 allowed channel opening and that closing was delayed in the absence of hydrolysis. The corresponding NBD1 mutations showed relatively little effect of preventing ATP hydrolysis but a large inhibition of blocking ATP binding. These data suggest that ATP binding to NBD1 is required for normal activity but that hydrolysis has little effect. Our results suggest that both NBDs contribute to channel gating, NBD1 binds ATP but supports little hydrolysis, and ATP binding and hydrolysis at NBD2 are key for normal gating.

Indexed as

Ion Channel GatingAdenosine TriphosphateBinding SitesCystic Fibrosis Transmembrane Conductance RegulatorDimerizationHumansHydrolysisAdenosine TriphosphateCFTR protein, humanCystic Fibrosis Transmembrane Conductance Regulator

Identifiers

PMID15623556
PMCPMC544308
OpenAlexW2092594813

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.