Evidence map›Paper›PMID 15623554›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2005

Zebrafish GADD45beta genes are involved in somite segmentation.

Atsuo Kawahara, Yong-Suk Che, Ryuki Hanaoka, Hiroyuki Takeda, Igor B Dawid

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 32 citations in OpenAlex.

  1. Gadd45 in Neuronal Development, Function, and Injury.Advances in experimental medicine and biology · 2022
    Review
  2. Roles for GADD45 in Development and Cancer.Advances in experimental medicine and biology · 2022
    Review
  3. Article
  4. Article
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  8. Review
  9. Developmental expression patterns of candidate cofactors for vertebrate six family transcription factors.Developmental dynamics : an official publication of the American Association of Anatomists · 2010
    Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Atsuo KawaharaLaboratory of Developmental Molecular Genetics, Horizontal Medical Research Organization, Kyoto University Faculty of Medicine, Yoshida, Sakyo-Ku, Kyoto 606-8501, Japan. atsuo@hmro.med.kyoto-u.ac.jp
Yong-Suk Che
Ryuki Hanaoka
Hiroyuki Takeda
Igor B Dawid
The University of Tokyo · JPKyoto University · JP

Funding

Gene Expression During Embryonic Development Of Xenopus LaevisZIAHD001002 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI DAWID, IGOR B · 2009 to 2016
$3.0M
Molecular Genetics Of Heritable Human DisordersZ01HD001002 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI DAWID, IGOR B · 1985 to 2008
$1.2M
6 · The paper itself

Abstract

Somites in vertebrates are periodic segmented structures that give rise to the vertebrae and muscles of body. Somites are generated from presomitic mesoderm (PSM), but it is not fully understood how cellular differentiation and segment formation are achieved in the anterior PSM. We report here that zebrafish gadd45beta1 and gadd45beta2 genes are periodically expressed as paired stripes adjacent to the neural tube in the anterior PSM region where presomitic cells mature. In mammals, it is known that GADD45 (growth arrest and DNA damage) family proteins play a role in cell-cycle control. We found that both knockdown and overexpression of gadd45beta genes caused somite defects with different consequences for marker gene expression. Knockdown of gadd45beta genes with antisense morpholino oligonucleotides caused a broad expansion of mesp-a in the PSM, and both cyclic expression of her1 and segmented expression of MyoD were disorganized. On the other hand, injection of gadd45beta1 or gadd45beta2 suppressed expression of mesp-a and her1 in anterior PSM and MyoD in paraxial mesoderm. These results indicate that regulated expression of gadd45beta genes in the anterior PSM is required for somite segmentation.

Indexed as

Amino Acid SequenceAnimalsCleavage Stage, OvumGADD45 ProteinsHumansIntracellular Signaling Peptides and ProteinsMAP Kinase Kinase Kinase 4MesodermMolecular Sequence DataProteinsSignal TransductionSomitesZebrafishGADD45 ProteinsIntracellular Signaling Peptides and ProteinsMAP Kinase Kinase Kinase 4Proteins

Identifiers

PMID15623554
PMCPMC544321
OpenAlexW1968830015

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.