Evidence map›Paper›PMID 15616582›Full record

ArticleThe EMBO journal2005

Mechanistically distinct roles for Sgs1p in checkpoint activation and replication fork maintenance.

Lotte Bjergbaek, Jennifer A Cobb, Monica Tsai-Pflugfelder, Susan M Gasser

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed, 142 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. RecQ DNA Helicase Rqh1 Promotes Rad3Molecular and cellular biology · 2020
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. The INO80 remodeller in transcription, replication and repair.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
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  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
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  19. Review
  20. Article

29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Lotte BjergbaekDepartment of Molecular Biology and NCCR, Frontiers in Genetics, University of Geneva, Quai Ernest-Ansermet 30, Geneva, Switzerland.
Jennifer A Cobb
Monica Tsai-Pflugfelder
Susan M Gasser
University of Geneva · CH

Funding

Health Promotion and Disease Prevention Research Center*U48DP000060 · DP · SAINT LOUIS UNIVERSITY · PI BAKER, ELIZABETH A · 2004 to 2008
$6.1M
NCCDPHP CDC HHS U48 DP000060
6 · The paper itself

Abstract

The RecQ helicase Sgs1p forms a complex with the type 1 DNA topoisomerase Top3p that resolves double Holliday junctions resulting from Rad51-mediated exchange. We find, however, that Sgs1p functions independently of both Top3p and Rad51p to stimulate the checkpoint kinase Rad53p when replication forks stall due to dNTP depletion on hydroxyurea. Checkpoint activation does not require Sgs1p function as a helicase, and correlates with its ability to bind the Rad53p kinase FHA1 motif directly. On the other hand, Sgs1p's helicase activity is required together with Top3p and the strand-exchange factor Rad51p, to help stabilise DNA polymerase epsilon at stalled replication forks. In this function, the Sgs1p/Top3p complex acts in parallel to the Claspin-related adaptor, Mrc1p, although the sgs1 and mrc1 mutations are epistatic for Rad53p activation. We thus identify two distinct pathways through which Sgs1p contributes to genomic integrity: checkpoint kinase activation requires Sgs1p as a noncatalytic Rad53p-binding site, while the combined Top3p/Sgs1p resolvase activity contributes to replisome stability and recovery from arrested replication forks.

Indexed as

Cell CycleDNA ReplicationCell Cycle ProteinsCheckpoint Kinase 2DNA HelicasesDNA Topoisomerases, Type IHydroxyureaImmunoprecipitationPhosphorylationProtein Serine-Threonine KinasesRecQ HelicasesSaccharomyces cerevisiae ProteinsTwo-Hybrid System TechniquesCell Cycle ProteinsCheckpoint Kinase 2DNA HelicasesDNA Topoisomerases, Type IHydroxyureaProtein Serine-Threonine KinasesRAD53 protein, S cerevisiaeRecQ HelicasesSaccharomyces cerevisiae ProteinsSGS1 protein, S cerevisiae

Identifiers

PMID15616582
PMCPMC545806
OpenAlexW2122259228

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.