Evidence map›Paper›PMID 15615769›Full record

ArticleHuman molecular genetics2005

Epigenetic overlap in autism-spectrum neurodevelopmental disorders: MECP2 deficiency causes reduced expression of UBE3A and GABRB3.

Rodney C Samaco, Amber Hogart, Janine M LaSalle

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 186 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
186citing papers in PubMed, 3 pooled it
14.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

186 citing papers in PubMed, 3 syntheses or guidelines pooled it, 416 citations in OpenAlex.

  1. Pooled it
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  16. Inhibitory Synaptic Influences on Developmental Motor Disorders.International journal of molecular sciences · 2023
    Review
  17. Article
  18. Article
  19. Gene×environment interactions in autism spectrum disorders.Current topics in developmental biology · 2023
    Review
  20. Shisa7 phosphorylation regulates GABAergic transmission and neurodevelopmental behaviors.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2022
    Article

126 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Rodney C SamacoMicrobiology and Immunology and Rowe Program in Human Genetics, School of Medicine, University of California, Davis, CA 95616, USA.
Amber Hogart
Janine M LaSalle
University of California, Davis · US

Funding

UCD MUTANT MOUSE REGIONAL RESOURCE CENTER: GENSAT PROJECTU42RR014905 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI BARTHOLD, STEPHEN WILLIAM · 1999 to 2011
$20.5M
The Role of MeCP2 in Rett SyndromeR01HD041462 · NICHD · UNIVERSITY OF CALIFORNIA DAVIS · PI LASALLE, JANINE M · 2002 to 2011
$2.8M
VASCULAR CONTROL OF BLOOD CELL REACTIVITY IN THROMBOSISR01NS041462 · NINDS · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI MARCUS, AARON JACOB · 2000 to 2005
$2.1M
BRAIN AND TISSUE BANK FOR DEVELOPMENTAL DISORDERSN01HD013138 · NICHD · UNIVERSITY OF MARYLAND BALTIMORE · PI ZIELKE, H. RONALD · 1991 to 1998
–
NCRR NIH HHS U42 RR014905NCRR NIH HHS U42 RR14905NICHD NIH HHS 1R01HD/NS41462NICHD NIH HHS N01-HD-1-3138NICHD NIH HHS R01 HD041462NINDS NIH HHS R01 NS041462
6 · The paper itself

Abstract

Autism is a common neurodevelopmental disorder of complex genetic etiology. Rett syndrome, an X-linked dominant disorder caused by MECP2 mutations, and Angelman syndrome, an imprinted disorder caused by maternal 15q11-q13 or UBE3A deficiency, have phenotypic and genetic overlap with autism. MECP2 encodes methyl-CpG-binding protein 2 that acts as a transcriptional repressor for methylated gene constructs but is surprisingly not required for maintaining imprinted gene expression. Here, we test the hypothesis that MECP2 deficiency may affect the level of expression of UBE3A and neighboring autism candidate gene GABRB3 without necessarily affecting imprinted expression. Multiple quantitative methods were used including automated quantitation of immunofluorescence and in situ hybridization by laser scanning cytometry on tissue microarrays, immunoblot and TaqMan PCR. The results demonstrated significant defects in UBE3A/E6AP expression in two different Mecp2 deficient mouse strains and human Rett, Angelman and autism brains compared with controls. Although no difference was observed in the allelic expression of several imprinted transcripts in Mecp2-null brain, Ube3a sense expression was significantly reduced, consistent with the decrease in protein. A non-imprinted gene from 15q11-q13, GABRB3, encoding the beta3 subunit of the GABAA receptor, also showed significantly reduced expression in multiple Rett, Angelman and autism brain samples, and Mecp2 deficient mice by quantitative immunoblot. These results suggest an overlapping pathway of gene dysregulation within 15q11-q13 in Rett, Angelman and autism and implicate MeCP2 in the regulation of UBE3A and GABRB3 expressions in the postnatal mammalian brain.

Indexed as

Angelman SyndromeAnimalsAutistic DisorderBrainChromatinChromosomal Proteins, Non-HistoneChromosomes, Human, Pair 15DNA-Binding ProteinsFemaleFluorescent Antibody TechniqueGene Expression Regulation, DevelopmentalGenomic ImprintingHumansIn Situ HybridizationLaser Scanning CytometryMaleChromatinChromosomal Proteins, Non-HistoneDNA-Binding ProteinsMECP2 protein, humanMecp2 protein, mouseMethyl-CpG-Binding Protein 2Receptors, GABA-ARepressor ProteinsUBE3A protein, humanUbiquitin-Protein Ligases

Identifiers

PMID15615769
PMCPMC1224722
OpenAlexW2098914660

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.