Evidence map›Paper›PMID 15611160›Full record

ArticleGenetics2004

Genetic analysis of yeast Yip1p function reveals a requirement for Golgi-localized rab proteins and rab-Guanine nucleotide dissociation inhibitor.

Catherine Z Chen, Monica Calero, Carol J DeRegis, Matthew Heidtman, Charles Barlowe, Ruth N Collins

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Yip1A structures the mammalian endoplasmic reticulum.Molecular biology of the cell · 2010
    Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Catherine Z ChenDepartment of Molecular Medicine, Cornell University, Ithaca, New York 14853-6401, USA.
Monica Calero
Carol J DeRegis
Matthew Heidtman
Charles Barlowe
Ruth N Collins
Cornell University · USDartmouth College · US

Funding

Mechanisms of COPII-dependent TransportR01GM052549 · NIGMS · DARTMOUTH COLLEGE · PI BARLOWE, CHARLES K · 1995 to 2024
$7.2M
Mechanisms of COPII-Dependent TransportR37GM052549 · NIGMS · DARTMOUTH COLLEGE · PI BARLOWE, CHARLES K · 2007 to 2016
$5.3M
TRAINING PROGRAM IN COMPARATIVE MEDICINET32RR007059 · NCRR · CORNELL UNIVERSITY ITHACA · PI PARKER, JOHN S · 1995 to 2011
$4.2M
NCRR NIH HHS T32 RR007059NCRR NIH HHS T32RR07059-08NIGMS NIH HHS GM52549NIGMS NIH HHS R01 GM052549NIGMS NIH HHS R37 GM052549
6 · The paper itself

Abstract

Yip1p is the first identified Rab-interacting membrane protein and the founder member of the YIP1 family, with both orthologs and paralogs found in all eukaryotic genomes. The exact role of Yip1p is unclear; YIP1 is an essential gene and defective alleles severely disrupt membrane transport and inhibit ER vesicle budding. Yip1p has the ability to physically interact with Rab proteins and the nature of this interaction has led to suggestions that Yip1p may function in the process by which Rab proteins translocate between cytosol and membranes. In this study we have investigated the physiological requirements for Yip1p action. Yip1p function requires Rab-GDI and Rab proteins, and several mutations that abrogate Yip1p function lack Rab-interacting capability. We have previously shown that Yip1p in detergent extracts has the capability to physically interact with Rab proteins in a promiscuous manner; however, a genetic analysis that covers every yeast Rab reveals that the Rab requirement in vivo is exclusively confined to a subset of Rab proteins that are localized to the Golgi apparatus.

Indexed as

COP-Coated VesiclesEndoplasmic ReticulumGolgi ApparatusGuanine Nucleotide Dissociation InhibitorsMembrane ProteinsMutationSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsVesicular Transport ProteinsGDP dissociation inhibitor 1Guanine Nucleotide Dissociation InhibitorsMembrane ProteinsSaccharomyces cerevisiae ProteinsVesicular Transport ProteinsYip1 protein, S cerevisiae

Identifiers

PMID15611160
PMCPMC1448722
OpenAlexW2098959254

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.