ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2005
Generation and analysis of expressed sequence tags from the salt-tolerant mangrove species Avicennia marina (Forsk) Vierh.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.
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33 citing papers in PubMed, 99 citations in OpenAlex.
- Heavy metal transformation in mangrove ecosystems: a multi-scale perspective from intertidal dynamics to plant adaptive responses.Forestry research · 2026Review
- From swamp to field: how genes from mangroves and its associates can enhance crop salinity tolerance.Molecular biology reports · 2024Review
- Functional characterization of a manganese superoxide dismutase from Avicennia marina: insights into its role in salt, hydrogen peroxide, and heavy metal tolerance.Scientific reports · 2024Article
- Characterization and Expression Analysis of Four Cadmium-Tolerance-Associated Genes ofBiology · 2023Article
- Genetic and molecular mechanisms underlying mangrove adaptations to intertidal environments.iScience · 2022Review
- A reference-grade genome identifies salt-tolerance genes from the salt-secreting mangrove species Avicennia marina.Communications biology · 2021Article
- A high-quality genome assembly and annotation of the gray mangrove, Avicennia marina.G3 (Bethesda, Md.) · 2021Article
- Transcriptome skimming of lentil (Lens culinaris Medikus) cultivars with contrast reaction to salt stress.Functional & integrative genomics · 2021Article
- Identification of salt-responsive genes from C4 halophytePhysiology and molecular biology of plants : an international journal of functional plant biology · 2020Article
- Looking at Halophytic Adaptation to High Salinity Through Genomics Landscape.Current genomics · 2017Review
- Making Plants Break a Sweat: the Structure, Function, and Evolution of Plant Salt Glands.Frontiers in plant science · 2017Review
- Generation, Annotation, and Analysis of a Large-Scale Expressed Sequence Tag Library fromFrontiers in plant science · 2017Article
- Over-expression of a NAC 67 transcription factor from finger millet (Eleusine coracana L.) confers tolerance against salinity and drought stress in rice.BMC biotechnology · 2016Article
- RAPD and ISSR marker mediated genetic polymorphism of two mangroves Bruguiera gymnorrhiza and Heritiera fomes from Indian Sundarbans in relation to their sustainability.Physiology and molecular biology of plants : an international journal of functional plant biology · 2015Article
- Transcriptome analysis of salinity responsiveness in contrasting genotypes of finger millet (Eleusine coracana L.) through RNA-sequencing.Plant molecular biology · 2014Article
- Generation and analysis of expressed sequence tags (ESTs) from halophyte Atriplex canescens to explore salt-responsive related genes.International journal of molecular sciences · 2014Article
- Transcriptome sequencing and analysis of leaf tissue of Avicennia marina using the Illumina platform.PloS one · 2014Article
- Proteomic analysis of salt-responsive proteins in the leaves of mangrove Kandelia candel during short-term stress.PloS one · 2014Article
- A novel gene SbSI-2 encoding nuclear protein from a halophyte confers abiotic stress tolerance in E. coli and tobacco.PloS one · 2014Article
- Transcriptome characterization and sequencing-based identification of salt-responsive genes in Millettia pinnata, a semi-mangrove plant.DNA research : an international journal for rapid publication of reports on genes and genomes · 2012Article
Corrections and comments
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Authors and funding
5 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Salinization poses an increasingly serious problem in coastal and agricultural areas with negative effects on plant productivity and yield. Avicennia marina is a pantropical mangrove species that can survive in highly saline conditions. As a first step towards the characterization of genes that contribute to combating salinity stress, the construction of a cDNA library of A. marina genes is reported here. Random expressed sequence tag (EST) sequencing of 1,841 clones produced 1,602 quality reads. These clones were classified into functional categories, and BLAST: comparisons revealed that 113 clones were homologous to genes earlier implicated in stress responses, of which the dehydrins are the most predominant in this category. Of the ESTs analyzed, 30% showed homology to previously uncharacterized genes in the public plant databases. Of these 30%, 52 clones were selected for reverse Northern analysis: 26 were shown to be up-regulated and five shown to be down-regulated. The results obtained by reverse Northern analysis were confirmed by Northern analysis for three clones.
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